Stem-loop osa-MIR2090

Accession

MI0010550

Description

Oryza sativa osa-MIR2090 precursor miRNA

Literature search

1 open access papers mention osa-MIR2090
(1 sentences)

Sequence

18423 reads, 103.0 reads per million, 97 experiments

auuauuAACUCUGAUUCUAGAAUUUUUGCGuuaaagcgaggacgagaacgaaaaacacuguaagacacuuuaacgCAAAAAUUCCAGAAUCGGAUCCUUaucc
.........(((((((((.(((((((((((((((((.(...(((..............)))....).))))))))))))))))).))))))))).........

Structure

auuauuAAC         A                 c -agg   agaacg 
         UCUGAUUCU GAAUUUUUGCGuuaaag g    acg      a
         ||||||||| ||||||||||||||||| |    |||       
         AGGCUAAGA CUUAAAAACgcaauuuc c    ugu      a
ccuaUUCCU         C                 a agaa   cacaaa 

Annotation confidence High

Genome context

1: 38764289-38764391 [-]

Mature osa-miR2090-5p

• Accession: MIMAT0010045
• Description: Oryza sativa osa-miR2090-5p mature miRNA
• Sequence: 7 - AACUCUGAUUCUAGAAUUUUUGCG - 30
• Evidence: experimental ; Illumina [1]

Mature osa-miR2090-3p

• Accession: MIMAT0056104
• Description: Oryza sativa osa-miR2090-3p mature miRNA
• Sequence: 76 - CAAAAAUUCCAGAAUCGGAUCCUU - 99
• Evidence: experimental ; unknown

References

1. PubMed ID: 19103661
   Characterization and expression profiles of miRNAs in rice seeds
   "Xue LJ, Zhang JJ, Xue HW"
   "Nucleic Acids Res (2009) 37:916-930