miRBase entry: dmo-mir-6-3

Stem-loop dmo-mir-6-3

Accession

MI0009226

Description

Drosophila mojavensis dmo-mir-6-3 precursor miRNA

Sequence

aaagagaagagaacguucgcuguugauguagucgaauucauuuaaucuuuaUAUCACAGUGGCUGUUCUUUUUuguuu
(((.(((((((((((.(((((((.(((((((..((..........)).)))))))))))))).))))))))))).)))

Structure

   g           u       u       uc  auuc 
aaa agaagagaacg ucgcugu gauguag  ga    a
||| ||||||||||| ||||||| |||||||  ||     
uuu uUUUUUCUUGU GGUGACA CUAUauu  cu    u
   g           C       -       -u  aauu

Annotation confidence Not enough data

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Genome context

scaffold_6496: 20935959-20936036 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dmo-mir-6-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dmo-miR-6

Accession	MIMAT0008635
Description	Drosophila mojavensis dmo-miR-6 mature miRNA
Sequence	52 - UAUCACAGUGGCUGUUCUUUUU - 73
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218