Accession
MI0008291
Description
Oryza sativa
osa-MIR1882d precursor miRNA
Sequence
85207
reads,
346.0
reads per million, 107 experiments
uguuaucguuaccaauauccuAGAUUGCUUUCAAGGUCAUUUCUUuaggaaaccccauucccauaaauucaguauccaaagaugguuguuguaucuaugggaauaaggguucccuaacGAAAUGAUCUUGGACGCAAUCUAGgaguuugcugauaauaac
.(((((.((((.(((..(((((((((((.((((((((((((((.(((((.(((((.(((((((((.((.(((((.(((....))).))))).)).)))))))))..))))).))))).)))))))))))))).)))))))))))..))).)))).)))))
.(((((.((((.(((..(((((((((((.((((((((((((((.(((((.(((((.(((((((((.((.(((((.(((....))).))))).)).)))))))))..))))).))))).)))))))))))))).)))))))))))..))).)))).)))))
Structure
u c c ua U U a -c a u u a guuau guua caa uccuAGAUUGC UUCAAGGUCAUUUC Uuagg aaccc auucccaua au cagua cca a ||||| |||| ||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||| || ||||| ||| caaua uagu guu agGAUCUAACG AGGUUCUAGUAAAG aaucc uuggg uaaggguau ua guugu ggu g - a c ug C c c aa c u u a
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
8: 18739319-18739478 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from osa-MIR1882d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR1882d-5p
| Accession | MIMAT0007842 |
| Description | Oryza sativa osa-miR1882d-5p mature miRNA |
| Sequence | 22 - AGAUUGCUUUCAAGGUCAUUUCUU - 45 |
| Evidence |
experimental
454 [1] |
Mature osa-miR1882d-3p
| Accession | MIMAT0056089 |
| Description | Oryza sativa osa-miR1882d-3p mature miRNA |
| Sequence | 119 - GAAAUGAUCUUGGACGCAAUCUAG - 142 |
| Evidence |
experimental
unknown |
References
|
