Stem-loop mml-mir-27b

Accession

MI0007595

Description

Macaca mulatta mml-mir-27b precursor miRNA mir-27

Gene
family

RF00644; mir-27

Sequence

637032 reads, 4345 reads per million, 8 experiments

accucucuaacaaggugcAGAGCUUAGCUGAUUGGUGAACAgugauugguuuccgcuuugUUCACAGUGGCUAAGUUCUGCaccugaagagaaggug
((((((((....(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))..)))).)))).

Structure

-    -    aaca                 G    G       ugau   u 
 accu cucu    aggugcAGAGCUUAGCU AUUG UGAACAg    ugg  
 |||| ||||    ||||||||||||||||| |||| |||||||    ||| u
 ugga gaga    uccaCGUCUUGAAUCGG UGAC ACUUguu    gcc  
g    a    --ag                 -    -       --uc   u 

Annotation confidence High

Genome context

chr15: 108904304-108904400 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mml-mir-27b

Mature mml-miR-27b-3p

• Accession: MIMAT0006167
• Description: Macaca mulatta mml-miR-27b-3p mature miRNA
• Sequence: 61 - UUCACAGUGGCUAAGUUCUGC - 81
• Evidence: experimental ; Illumina [2]

Mature mml-miR-27b-5p

• Accession: MIMAT0026802
• Description: Macaca mulatta mml-miR-27b-5p mature miRNA
• Sequence: 19 - AGAGCUUAGCUGAUUGGUGAACA - 41
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45