Stem-loop osa-MIR1426

Accession

MI0006966

Description

Oryza sativa osa-MIR1426 precursor miRNA

Literature search

1 open access papers mention osa-MIR1426
(1 sentences)

Sequence

15 reads, 10 reads per million, 2 experiments

aaauAGAAUCUUGAUGAUGAUUAAAaggagggacgauaggcaggccgugaagcaaauauguaagacgguugccgggaauucuagaaagugaaaaaaaaaccccauugauaaucauauucgauuuucaaaa
.....(((..((((..(((((((..((..(((......(((((.((((...(((....)))...))))))))).....(((........))).......)))..))..)))))))..))))..)))....

Structure

aaauA   UC    UG       AA  ga   --------------------acgaua     g    gaa   a 
     GAA  UUGA  AUGAUUA  ag  ggg                          ggcag ccgu   gca a
     |||  ||||  |||||||  ||  |||                          ||||| ||||   |||  
     cuu  agcu  uacuaau  uu  ccc                          ccguu ggca   ugu u
-aaaa   uu    ua       ag  ac   aaaaaaaaagugaaagaucuuaaggg     -    gaa   a 

Annotation confidence Not enough data

Genome context

Chr1: 7189218-7189347 [-]

Mature osa-miR1426

• Accession: MIMAT0005960
• Description: Oryza sativa osa-miR1426 mature miRNA
• Sequence: 5 - AGAAUCUUGAUGAUGAUUAAA - 25
• Evidence: experimental ; MPSS [1], Northern [1]

References

1. PubMed ID: 18353984
   Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)
   "Lu C, Jeong DH, Kulkarni K, Pillay M, Nobuta K, German R, Thatcher SR, Maher C, Zhang L, Ware D, Liu B, Cao X, Meyers BC, Green PJ"
   "Proc Natl Acad Sci U S A (2008) 105:4951-4956