Stem-loop osa-MIR1426

Accession

MI0006966

Description

Oryza sativa osa-MIR1426 precursor miRNA

Literature search

1 open access papers mention osa-MIR1426
(1 sentences)

Sequence

3727 reads, 12.0 reads per million, 117 experiments

aaauagaaucuugaugaugauuaaaaggagggacgauAGGCAGGCCGUGAAGCAAAuauguaagacgguugccgggaauucuagaaagugaaaaaaaaACCCCAUUGAUAAUCAUAUUCGAUuuucaaaa
.....(((..((((..(((((((..((..(((......(((((.((((...(((....)))...))))))))).....(((........))).......)))..))..)))))))..))))..)))....

Structure

aaaua   uc    ug       aa  ga   --------------------acgauA     G    GAA   A 
     gaa  uuga  augauua  ag  ggg                          GGCAG CCGU   GCA A
     |||  ||||  |||||||  ||  |||                          ||||| ||||   |||  
     cuu  AGCU  UACUAAU  UU  CCC                          ccguu ggca   ugu u
-aaaa   uU    UA       AG  AC   Aaaaaaaaagugaaagaucuuaaggg     -    gaa   a 

Annotation confidence Low

Genome context

1: 7189218-7189347 [-]

Mature osa-miR1426-5p

• Accession: MIMAT0005960
• Description: Oryza sativa osa-miR1426-5p mature miRNA
• Sequence: 38 - AGGCAGGCCGUGAAGCAAA - 56
• Evidence: experimental ; MPSS [1], Northern [1]

Mature osa-miR1426-3p

• Accession: MIMAT0056025
• Description: Oryza sativa osa-miR1426-3p mature miRNA
• Sequence: 99 - ACCCCAUUGAUAAUCAUAUUCGAU - 122
• Evidence: experimental ; unknown

References

1. PubMed ID: 18353984
   Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)
   "Lu C, Jeong DH, Kulkarni K, Pillay M, Nobuta K, German R, Thatcher SR, Maher C, Zhang L, Ware D, Liu B, Cao X, Meyers BC, Green PJ"
   "Proc Natl Acad Sci U S A (2008) 105:4951-4956