Stem-loop hsa-mir-1197

Accession

MI0006656

Symbol

HGNC: MIR1197

Description

Homo sapiens hsa-mir-1197 precursor miRNA mir-1197

Gene
family

RF04290; mir-1197

Literature search

4 open access papers mention hsa-mir-1197
(4 sentences)

Sequence

224 reads, 2 reads per million, 65 experiments

acuuccugguauuugaagaugcgguugaccaugguguguacgcuuuauuugugacgUAGGACACAUGGUCUACUUCUucucaauauca
......(((((((.(((((...(((.(((((((.(((.(((((.........).))))..)))))))))).))))))))..)))))))

Structure

acuucc       -u     ugc   u       g   -g    - uuu 
      ugguauu  gaaga   ggu gaccaug ugu  uacg c   a
      |||||||  |||||   ||| ||||||| |||  |||| |   u
      acuauaa  cuUCU   UCA CUGGUAC ACA  AUgc g   u
------       cu     ---   U       -   GG    a ugu 

Annotation confidence Not enough data

Comments

Afanasyeva et al. refer to this sequence using the internal identifier MYCNSC_NB5_330 [1]. Some additional sequences reported in [1] do not meet miRBase requirements for miRNA identification.

Genome context

chr14: 101025564-101025651 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from hsa-mir-1197

Disease association

hsa-mir-1197 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-1197

• Accession: MIMAT0005955
• Description: Homo sapiens hsa-miR-1197 mature miRNA
• Sequence: 57 - UAGGACACAUGGUCUACUUCU - 77
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18230126
   New miRNAs cloned from neuroblastoma
   "Afanasyeva EA, Hotz-Wagenblatt A, Glatting KH, Westermann F"
   "BMC Genomics (2008) 9:52