Stem-loop mtr-MIR169b

Accession

MI0005625

Description

Medicago truncatula mtr-MIR169b precursor miRNA

Literature search

12 open access papers mention mtr-MIR169b
(53 sentences)

Sequence

3482 reads, 53.0 reads per million, 108 experiments

gagugCAGCCAAGGAUGACUUGCCGGuaauauaucuaauuccuugguuucuuccGGCAAGUUGUUCUUGACUACAuu
.((((.((.(((((((((((((((((......(((.........))).....))))))))))))))))).)).))))

Structure

g    C  C                 uaauau   uaa 
 agug AG CAAGGAUGACUUGCCGG      auc   u
 |||| || |||||||||||||||||      |||   u
 uuAC UC GUUCUUGUUGAACGGcc      ugg   c
-    A  A                 -uucuu   uuc 

Annotation confidence High

Genome context

Unknown

Mature mtr-miR169b-5p

• Accession: MIMAT0011111
• Description: Medicago truncatula mtr-miR169b-5p mature miRNA
• Sequence: 6 - CAGCCAAGGAUGACUUGCCGG - 26
• Evidence: experimental ; Illumina [1]

Mature mtr-miR169b-3p

• Accession: MIMAT0054789
• Description: Medicago truncatula mtr-miR169b-3p mature miRNA
• Sequence: 55 - GGCAAGUUGUUCUUGACUACA - 75
• Evidence: experimental ; unknown

References

1. 
   "Bonnet E"
   (2007) None:


2. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553