Stem-loop osa-MIR814a

Accession

MI0005239

Description

Oryza sativa osa-MIR814a precursor miRNA

Literature search

3 open access papers mention osa-MIR814a
(8 sentences)

Sequence

128121 reads, 560.0 reads per million, 142 experiments

accuaguaccggacgagacacuucauAGUACAACGAAUCUGGACAGuaagccuGUCCAGAUUCGUUGUACUAugaagugucauauccgguccuaagu
...(((.((((((.(.((((((((((((((((((((((((((((((.....)))))))))))))))))))))))))))))).).)))))).)))...

Structure

acc   u      c a                              u 
   uag accgga g gacacuucauAGUACAACGAAUCUGGACAG a
   ||| |||||| | |||||||||||||||||||||||||||||| a
   auc uggccu u cugugaaguAUCAUGUUGCUUAGACCUGuc g
uga   c      a a                              c 

Annotation confidence Medium

Comments

miR814 was misnamed miR573 by Luo et al [1].

Genome context

1: 22375030-22375126 [+]

Mature osa-miR814a-5p

• Accession: MIMAT0004055
• Description: Oryza sativa osa-miR814a-5p mature miRNA
• Sequence: 27 - AGUACAACGAAUCUGGACAG - 46
• Evidence: experimental ; cloned [1], Northern [1]

Mature osa-miR814a-3p

• Accession: MIMAT0056005
• Description: Oryza sativa osa-miR814a-3p mature miRNA
• Sequence: 54 - GUCCAGAUUCGUUGUACUA - 72
• Evidence: experimental ; unknown

References

1. PubMed ID: 16959252
   Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development
   "Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH"
   "FEBS Lett (2006) 580:5111-5116