Stem-loop bta-mir-148b

Accession

MI0005030

Description

Bos taurus bta-mir-148b precursor miRNA mir-148

Gene
family

RF00248; mir-148

Literature search

52 open access papers mention bta-mir-148b
(328 sentences)

Sequence

5891864 reads, 1605.0 reads per million, 320 experiments

uuagcauuugagguGAAGUUCUGUUAUACACUCAGGCUguggcucucugaaagUCAGUGCAUCACAGAACUUUGUcucgaaagcuuucua
..(((.((((((((((((((((((.((.((((..((((.............)))))))).)).)))))))))))))))))).))).....

Structure

---uu   a                  U  A    CA    guggc 
     agc uuugagguGAAGUUCUGU AU CACU  GGCU     u
     ||| |||||||||||||||||| || ||||  ||||     c
     ucg aagcucUGUUUCAAGACA UA GUGA  CUga     u
aucuu   a                  C  C    --    aaguc 

Annotation confidence High

Genome context

5: 25734105-25734194 [-]

Mature bta-miR-148b-5p

• Accession: MIMAT0060953
• Description: Bos taurus bta-miR-148b-5p mature miRNA
• Sequence: 15 - GAAGUUCUGUUAUACACUCAGGCU - 38
• Evidence: experimental ; cloned [1-2]

Mature bta-miR-148b-3p

• Accession: MIMAT0003814
• Description: Bos taurus bta-miR-148b-3p mature miRNA
• Sequence: 54 - UCAGUGCAUCACAGAACUUUGU - 75
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988