Stem-loop bta-mir-15b

Accession

MI0005012

Description

Bos taurus bta-mir-15b precursor miRNA mir-15

Gene
family

RF00455; mir-15

Literature search

113 open access papers mention bta-mir-15b
(346 sentences)

Sequence

1055013 reads, 253.0 reads per million, 320 experiments

uugagaccuuaaaguacugUAGCAGCACAUCAUGGUUUACAuacuacagucaagaugCGAAUCAUUAUUUGCUGCUCUAgaaauuuaaggaaauucau
.((((.(((((((...(((.(((((((.((.(((((((.(((.((.......))))).))))))).)).))))))).)))...)))))))...)))).

Structure

u    --a       gua   U       C  C       A   a  ac 
 ugag   ccuuaaa   cug AGCAGCA AU AUGGUUU CAu cu  a
 ||||   |||||||   ||| ||||||| || ||||||| ||| ||  g
 acuu   ggaauuu   gAU UCGUCGU UA UACUAAG gua ga  u
u    aaa       aaa   C       U  U       C   -  ac 

Annotation confidence High

Genome context

1: 107073765-107073862 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-15b

Mature bta-miR-15b-5p

• Accession: MIMAT0003792
• Description: Bos taurus bta-miR-15b-5p mature miRNA
• Sequence: 20 - UAGCAGCACAUCAUGGUUUACA - 41
• Evidence: experimental ; cloned [1-2]

Mature bta-miR-15b-3p

• Accession: MIMAT0060947
• Description: Bos taurus bta-miR-15b-3p mature miRNA
• Sequence: 58 - CGAAUCAUUAUUUGCUGCUCUA - 79
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988