Stem-loop hsa-mir-548a-2

Accession

MI0003598

Symbol

HGNC: MIR548A2

Description

Homo sapiens hsa-mir-548a-2 precursor miRNA

Literature search

57 open access papers mention hsa-mir-548a-2
(172 sentences)

Sequence

7372 reads, 30.0 reads per million, 135 experiments

ugugauguguauuagguuugugcAAAAGUAAUUGGGGUUUUUugccguuaaaaguaauggCAAAACUGGCAAUUACUUUUGCaccaaacuaauauaa
.......((((((((..(.(((((((((((((((.(((((..((((((((....)))))))))))))..))))))))))))))).)..)))))))).

Structure

ugugaug        gu u               -G     UU        a 
       uguauuag  u gugcAAAAGUAAUUG  GGUUU  ugccguua a
       ||||||||  | |||||||||||||||  |||||  ||||||||  
       auauaauc  a caCGUUUUCAUUAAC  UCAAA  ACgguaau a
------a        aa c               GG     --        g 

Annotation confidence Medium

Genome context

chr6: 135239160-135239256 [+]

Disease association

hsa-mir-548a-2 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-548a-2-5p

• Accession: MIMAT0050504
• Description: Homo sapiens hsa-miR-548a-2-5p mature miRNA
• Sequence: 24 - AAAAGUAAUUGGGGUUUUU - 42
• Evidence: experimental ; SAGE [1], cloned [2]

Mature hsa-miR-548a-3p

• Accession: MIMAT0003251
• Description: Homo sapiens hsa-miR-548a-3p mature miRNA
• Sequence: 61 - CAAAACUGGCAAUUACUUUUGC - 82
• Evidence: experimental ; SAGE [1], cloned [2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692