Stem-loop hsa-mir-561

Accession

MI0003567

Symbol

HGNC: MIR561

Description

Homo sapiens hsa-mir-561 precursor miRNA mir-561

Gene
family

RF03460; mir-561

Literature search

5 open access papers mention hsa-mir-561
(26 sentences)

Sequence

1425 reads, 13 reads per million, 91 experiments

cuucauccaccaguccuccaggaacAUCAAGGAUCUUAAACUUUGCCagagcuacaaaggCAAAGUUUAAGAUCCUUGAAGUuccugggggaaccau
.............((((((((((((.(((((((((((((((((((((...........))))))))))))))))))))).)))))))))))).....

Structure

cuucauccaccag            A                     agag 
             uccuccaggaac UCAAGGAUCUUAAACUUUGCC    c
             |||||||||||| |||||||||||||||||||||    u
             aggggguccuUG AGUUCCUAGAAUUUGAAACgg    a
--------uacca            A                     aaac 

Annotation confidence High

Genome context

chr2: 188297492-188297588 [+]

Disease association

hsa-mir-561 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-561-3p

• Accession: MIMAT0003225
• Description: Homo sapiens hsa-miR-561-3p mature miRNA
• Sequence: 61 - CAAAGUUUAAGAUCCUUGAAGU - 82
• Evidence: experimental ; SAGE [1], cloned [2]

Mature hsa-miR-561-5p

• Accession: MIMAT0022706
• Description: Homo sapiens hsa-miR-561-5p mature miRNA
• Sequence: 26 - AUCAAGGAUCUUAAACUUUGCC - 47
• Evidence: not_experimental

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 16505370
   The colorectal microRNAome
   "Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T, Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK, Roberts BS, Juhl H, Kinzler KW, Vogelstein B, Velculescu VE"
   "Proc Natl Acad Sci U S A (2006) 103:3687-3692