miRBase entry: hsa-mir-500a

Stem-loop hsa-mir-500a


Accession
MI0003184
Symbol
HGNC: MIR500A
Description
Homo sapiens hsa-mir-500a precursor miRNA mir-500
Gene
family?
RF01903; mir-500

Summary
Caution, this is an AI generated summary based on literature. This may have errors. ?

MIR500A is a microRNA whose expression can be influenced by pharmacological interventions, as evidenced by a study where specific drugs were found to increase MIR500A promoter activity, suggesting a potential regulatory mechanism influenced by these compounds [PMC8253104]. The study further confirmed the specificity of the drugs' effect on MIR500A expression by demonstrating that treatment of parental SAOS 2 cells, which presumably do not have the same genetic alterations as the targeted cells, did not result in altered MIR500A expression [PMC8253104]. This finding is significant as it helps to rule out off-target effects of the drugs, reinforcing that the observed increase in promoter activity is likely due to a direct effect on MIR500A regulation [PMC8253104].

Literature search
33 open access papers mention hsa-mir-500a
(232 sentences)

Sequence

30079 reads, 268 reads per million, 151 experiments
gcucccccucucUAAUCCUUGCUACCUGGGUGAGAgugcugucugaaugcaAUGCACCUGGGCAAGGAUUCUGagagcgagagc
((((.(.(((((.(((((((((...(((((((....(((.........)))...))))))))))))))))..))))).).))))

Structure
    c c     -U         UAC       AGAg   ugu 
gcuc c cucuc  AAUCCUUGC   CUGGGUG    ugc   c
|||| | |||||  |||||||||   |||||||    |||   u
cgag g gagaG  UUAGGAACG   GGUCCAC    acg   g
    a c     UC         ---       -GUA   uaa 


Annotation confidence High
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Genome context
chrX: 50008431-50008514 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from hsa-mir-500a
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-500a is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-500a-5p

Accession MIMAT0004773
Description Homo sapiens hsa-miR-500a-5p mature miRNA
Sequence 13 - UAAUCCUUGCUACCUGGGUGAGA - 35
Evidence experimental
cloned [2]
Database links
Predicted targets

Mature hsa-miR-500a-3p

Accession MIMAT0002871
Description Homo sapiens hsa-miR-500a-3p mature miRNA
Sequence 52 - AUGCACCUGGGCAAGGAUUCUG - 73
Evidence experimental
array-cloned [1], cloned [2]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 15965474
    Identification of hundreds of conserved and nonconserved human microRNAs
    "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
    "Nat Genet (2005) 37:766-770