Stem-loop hsa-mir-485

Accession

MI0002469

Symbol

HGNC: MIR485

Description

Homo sapiens hsa-mir-485 precursor miRNA mir-485

Gene
family

RF04296; mir-485

Literature search

64 open access papers mention hsa-mir-485
(200 sentences)

Sequence

7675 reads, 29 reads per million, 81 experiments

acuuggagAGAGGCUGGCCGUGAUGAAUUCgauucaucaaagcgaGUCAUACACGGCUCUCCUCUCUuuuagu
(((.(((((((((..(((((((((((.((((...........)))))))).)))))))..))))))))).)))

Structure

   u         CU       -    A    auuc 
acu ggagAGAGG  GGCCGUG AUGA UUCg    a
||| |||||||||  ||||||| |||| ||||    u
uga uuUCUCUCC  UCGGCAC UACU Gagc    c
   u         UC       A    -    gaaa 

Annotation confidence High

Genome context

chr14: 101055419-101055491 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from hsa-mir-485

Disease association

hsa-mir-485 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-485-5p

• Accession: MIMAT0002175
• Description: Homo sapiens hsa-miR-485-5p mature miRNA
• Sequence: 9 - AGAGGCUGGCCGUGAUGAAUUC - 30
• Evidence: experimental ; array-cloned [2], cloned [3]

Mature hsa-miR-485-3p

• Accession: MIMAT0002176
• Description: Homo sapiens hsa-miR-485-3p mature miRNA
• Sequence: 46 - GUCAUACACGGCUCUCCUCUCU - 67
• Evidence: experimental ; cloned [1,3], array-cloned [2]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 15978578
   Identification of human fetal liver miRNAs by a novel method
   "Fu H, Tie Y, Xu C, Zhang Z, Zhu J, Shi Y, Jiang H, Sun Z, Zheng X"
   "FEBS Lett (2005) 579:3849-3854


3. PubMed ID: 15965474
   Identification of hundreds of conserved and nonconserved human microRNAs
   "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
   "Nat Genet (2005) 37:766-770