miRBase entry: dre-mir-26a-3

Stem-loop dre-mir-26a-3


Accession
MI0001926
Description
Danio rerio dre-mir-26a-3 precursor miRNA mir-26
Gene
family?
RF00244; mir-26

Literature search
9 open access papers mention dre-mir-26a-3
(119 sentences)

Sequence

142578 reads, 8798 reads per million, 11 experiments
cuaagcugauacugagucaguguguggcugcaaccuggUUCAAGUAAUCCAGGAUAGGCUuuguggacuaggguuggccuguucuugguuacuugcacuggguugcagcuacuaaacaacuaagaagaucagaagag
.....(((((.((.......(((((((((((((((((((.(((((((((.((((((((((...............)))))))))).))))))))).))))))))))))))))...))).......))))))).....

Structure
cuaag     a  gagucag   ---                U         C          uugugg 
     cugau cu       ugu   guggcugcaaccuggU CAAGUAAUC AGGAUAGGCU      a
     ||||| ||       |||   |||||||||||||||| ||||||||| ||||||||||      c
     gacua ga       aca   caucgacguuggguca guucauugg ucuuguccgg      u
gagaa     -  agaauca   aau                c         u          uuggga 


Annotation confidence Not enough data
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Genome context
chr24: 20470954-20471090 [-]

Database links

Mature dre-miR-26a-5p

Accession MIMAT0001794
Description Danio rerio dre-miR-26a-5p mature miRNA
Sequence 39 - UUCAAGUAAUCCAGGAUAGGCU - 60
Evidence experimental
cloned [1]
Database links
Predicted targets

References

  1. PubMed ID: 15937218
    The developmental miRNA profiles of zebrafish as determined by small RNA cloning
    "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
    "Genes Dev (2005) 19:1288-1293