Stem-loop dre-mir-26a-1

Accession

MI0001923

Description

Danio rerio dre-mir-26a-1 precursor miRNA mir-26

Gene
family

RF00244; mir-26

Literature search

9 open access papers mention dre-mir-26a-1
(119 sentences)

Sequence

142929 reads, 8754 reads per million, 11 experiments

uuuggccuggUUCAAGUAAUCCAGGAUAGGCUugugauguccggaaagCCUAUUCGGGAUGACUUGGUUCaggaauga
.....(((((.((((((.((((.((((((((((............)))))))))).)))).)))))).))))).....

Structure

uuugg     U      A    A          gugau 
     ccugg UCAAGU AUCC GGAUAGGCUu     g
     ||||| |||||| |||| ||||||||||      
     ggaCU GGUUCA UAGG CUUAUCCgaa     u
aguaa     U      G    G          aggcc 

Annotation confidence High

Genome context

chr9: 41733533-41733610 [+]

Mature dre-miR-26a-5p

• Accession: MIMAT0001794
• Description: Danio rerio dre-miR-26a-5p mature miRNA
• Sequence: 11 - UUCAAGUAAUCCAGGAUAGGCU - 32
• Evidence: experimental ; cloned [1]

Mature dre-miR-26a-3p

• Accession: MIMAT0031947
• Description: Danio rerio dre-miR-26a-3p mature miRNA
• Sequence: 49 - CCUAUUCGGGAUGACUUGGUUC - 70
• Evidence: not_experimental

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293