Stem-loop gga-mir-181a-2

Accession

MI0001243

Description

Gallus gallus gga-mir-181a-2 precursor miRNA

Literature search

13 open access papers mention gga-mir-181a-2
(106 sentences)

Sequence

1379744 reads, 15339 reads per million, 5 experiments

gccaucuuuggauagcuucagugAACAUUCAACGCUGUCGGUGAGUuugagaacuaagaaaaaccaucgaccguugacuguaccuugaggu
.(((....)))...(((((((.(.(((.((((((..(((((((.((((............))))))))))))))))).))).).)))))))

Structure

gccaucuuuggaua       u A   U      CU       A    gagaa 
              gcuucag g ACA UCAACG  GUCGGUG GUuu     c
              ||||||| | ||| ||||||  ||||||| ||||      
              uggaguu c ugu aguugc  cagcuac caaa     u
--------------       c a   c      --       -    aagaa 

Annotation confidence Not enough data

Genome context

chr17: 9982132-9982222 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-181a-2

Mature gga-miR-181a-5p

• Accession: MIMAT0001168
• Description: Gallus gallus gga-miR-181a-5p mature miRNA
• Sequence: 24 - AACAUUCAACGCUGUCGGUGAGU - 46
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. PubMed ID: 18256158
   MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs
   "Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Watson M, Nair V"
   "J Virol (2008) 82:4007-4015


3. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None: