Stem-loop osa-MIR156g

Accession

MI0000659

Description

Oryza sativa osa-MIR156g precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

120 open access papers mention osa-MIR156g
(679 sentences)

Sequence

373752 reads, 258296 reads per million, 2 experiments

ggcUGACAGAAGAGAGUGAGCACacagcgggcagacugcaucugaauuaccuguugcgacgaagaagacgacggacgcagcuugccguugcguGCUCACUUCUCUCUCUGUCAGCu
(((((((((((((((((((((((.((((((..((.((((.((((.........(((...))).........)))).))))))..)))))).)))))))).))))).))))))))))

Structure

          -     -        a      gc  a    a    aauuaccug   c 
ggcUGACAGA AGAGA GUGAGCAC cagcgg  ag cugc ucug         uug  
|||||||||| ||||| |||||||| ||||||  || |||| ||||         ||| g
uCGACUGUCU UCUCU CACUCGug guugcc  uc gacg aggc         agc  
          C     U        c      gu  -    c    agcagaaga   a 

Annotation confidence High

Genome context

Chr9: 15065253-15065368 [+]

Mature osa-miR156g-5p

• Accession: MIMAT0000624
• Description: Oryza sativa osa-miR156g-5p mature miRNA
• Sequence: 4 - UGACAGAAGAGAGUGAGCAC - 23
• Evidence: not_experimental

Mature osa-miR156g-3p

• Accession: MIMAT0022848
• Description: Oryza sativa osa-miR156g-3p mature miRNA
• Sequence: 94 - GCUCACUUCUCUCUCUGUCAGC - 115
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 12101121
   MicroRNAs in plants
   "Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP"
   "Genes Dev (2002) 16:1616-1626


2. PubMed ID: 21901091
   Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors
   Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y
   PLoS Pathog (2011) 7:e1002176