Accession
MI0000324
Description
Caenorhabditis elegans
cel-mir-248 precursor miRNA mir-248
Gene
family?
family?
RF00820;
mir-248
Literature search
2 open access papers mention cel-mir-248
(12 sentences)
(12 sentences)
Sequence
47057
reads,
182
reads per million, 16 experiments
uuucccggcugcaacuacgguaagcgguauccagccgauguuuucaauacugcauuugaAUACACGUGCACGGAUAACGCUCAuuguuuuucgcaugc
.......(((((((..(((((.((((.(((((.((((.(((.(((((........))))).))))).))..))))).)))).)))))..)).))).))
.......(((((((..(((((.((((.(((((.((((.(((.(((((........))))).))))).))..))))).)))).)))))..)).))).))
Structure
uuucccg - - cu a g -a - a u uac
gc ugc aa acggu agcg uaucc gc cg ugu uucaa u
|| ||| || ||||| |||| ||||| || || ||| |||||
cg acg uu uguuA UCGC AUAGG CG GC ACA Aaguu g
------- u c uu C A CA U - U uac
Annotation confidence
Low
Do you think this miRNA is real?
Comments
The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [2].
Genome context
chrX: 2262373-2262470 [-]
Database links
Mature cel-miR-248
| Accession | MIMAT0000304 |
| Description | Caenorhabditis elegans cel-miR-248 mature miRNA |
| Sequence | 60 - AUACACGUGCACGGAUAACGCUCA - 83 |
| Evidence |
experimental
cloned [1-2], Northern [1], Illumina [3], CLIPseq [4] |
| Database links |
|
| Predicted targets |
|
References
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