Accession
MI0000035
Description
Caenorhabditis elegans
cel-mir-64 precursor miRNA
Literature search
3 open access papers mention cel-mir-64
(11 sentences)
(11 sentences)
Sequence
4758112
reads,
12867.0
reads per million, 93 experiments
cuccccgcugaccucgccgaaUAUGACACUGAAGCGUUACCGAAccguuuucccacaccuggauuCGGUGCAACGAUCAGUGGCAUGCUcggcuagcgccaguuaaguau
......((((.(((.(((((.((((.((((((..(((((((((((((............))).)))))))..))).)))))).)))).))))).)).).)))).......
......((((.(((.(((((.((((.((((((..(((((((((((((............))).)))))))..))).)))))).)))).))))).)).).)))).......
Structure
-cucccc a - c a A AG -- - uuuuc
gcug c cu gccga UAUG CACUGA CGU UACCGAA ccg c
|||| | || ||||| |||| |||||| ||| ||||||| |||
ugac g ga cggcU GUAC GUGACU GCA GUGGCuu ggu c
uaugaau c c u C G -A AC a ccaca
Annotation confidence
High
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Genome context
chrIII: 2172848-2172957 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cel-mir-64
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cel-miR-64-5p
| Accession | MIMAT0000036 |
| Description | Caenorhabditis elegans cel-miR-64-5p mature miRNA |
| Sequence | 22 - UAUGACACUGAAGCGUUACCGAA - 44 |
| Evidence |
experimental
cloned [1-2], Northern [1], 454 [3], Illumina [4], CLIPseq [5] |
| Database links |
|
| Predicted targets |
|
Mature cel-miR-64-3p
| Accession | MIMAT0015105 |
| Description | Caenorhabditis elegans cel-miR-64-3p mature miRNA |
| Sequence | 66 - CGGUGCAACGAUCAGUGGCAUGCU - 89 |
| Evidence |
experimental
CLIPseq [5] |
| Database links |
|
References
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