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5 publications mentioning sbi-MIR169l

Open access articles that are associated with the species Sorghum bicolor and mention the gene name MIR169l. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 53
Other miRNAs from this paper: zma-MIR160a, zma-MIR160c, zma-MIR160d, zma-MIR160b, zma-MIR164a, zma-MIR164d, zma-MIR164b, zma-MIR164c, zma-MIR169a, zma-MIR169b, zma-MIR160e, zma-MIR172a, zma-MIR172d, zma-MIR172b, zma-MIR172c, sbi-MIR172b, sbi-MIR172c, sbi-MIR172a, sbi-MIR160d, sbi-MIR160a, sbi-MIR160c, sbi-MIR160b, sbi-MIR160e, sbi-MIR164a, sbi-MIR169b, sbi-MIR169a, sbi-MIR395b, sbi-MIR395a, sbi-MIR395d, sbi-MIR395e, sbi-MIR164b, sbi-MIR169c, sbi-MIR169d, sbi-MIR169f, sbi-MIR169g, sbi-MIR169i, sbi-MIR172e, sbi-MIR319a, zma-MIR395b, zma-MIR395c, zma-MIR395a, zma-MIR319a, zma-MIR319c, zma-MIR319b, zma-MIR319d, zma-MIR169c, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169k, zma-MIR169j, zma-MIR169d, zma-MIR169e, zma-MIR172e, zma-MIR160f, sbi-MIR164c, sbi-MIR395f, sbi-MIR160f, sbi-MIR164d, sbi-MIR164e, sbi-MIR169e, sbi-MIR169h, sbi-MIR169j, sbi-MIR169k, sbi-MIR169m, sbi-MIR169n, sbi-MIR172d, sbi-MIR319b, sbi-MIR395c, sbi-MIR395g, sbi-MIR395h, sbi-MIR395i, sbi-MIR395j, sbi-MIR395k, sbi-MIR395l, sbi-MIR437g, zma-MIR160g, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR395d, zma-MIR395e, zma-MIR395f, zma-MIR395g, zma-MIR395h, zma-MIR395i, zma-MIR395j, zma-MIR395k, zma-MIR395l, zma-MIR395m, zma-MIR395n, zma-MIR395o, zma-MIR395p, sbi-MIR169o, sbi-MIR169p, sbi-MIR169q, sbi-MIR172f, sbi-MIR5381, sbi-MIR5382, sbi-MIR5383, sbi-MIR5384, sbi-MIR5385, sbi-MIR5386, sbi-MIR5387a, sbi-MIR5388, sbi-MIR5389, sbi-MIR5387b
We found that variation in miR172 and miR395 expression correlated with flowering time whereas variation in miR169 expression correlated with sugar content in stems. [score:5]
Thus, the expression of miR169 and miR395 target genes, and their correlation with Brix and flowering phenotypes remains to be elucidated. [score:5]
The FRL2 and RR3 genes are novel targets of miR172Although our data might suggest a possible function of miR169 in sugar content and miR395 in flowering time, we could not detect any predicted target related to carbohydrate metabolism and flowering time respectively (Additional file 3, Table S3 and Additional file 4, Figure S1). [score:5]
Considering a cutoff level of two-fold change in miRNA expression, we found that miR169 and miR172 were expressed higher in BTx623 relative to Rio, and higher in LB/EF F2s compared to HB/LF F2s. [score:4]
Table S3 provides a list of predicted target genes of miR169, miR172, and miR395. [score:3]
This suggested that high expression levels of miR169 might lead to a reduction in stem sugar content regardless of flowering time. [score:3]
Click here for file Predicted targets of miR169, miR172, and miR395. [score:3]
Regarding sugar content in the stem, high expression of miR169 in BTx623 correlated with low Brix in the F2 plants selected. [score:3]
Although our data might suggest a possible function of miR169 in sugar content and miR395 in flowering time, we could not detect any predicted target related to carbohydrate metabolism and flowering time respectively (Additional file 3, Table S3 and Additional file 4, Figure S1). [score:3]
The expression of miR169 and miR172 was at least twice as high in BTx623 relative to that in Rio and this difference was inherited in the F2. [score:3]
Click here for file Targets of predicted for miR169, miR172 and miR395 microRNAs. [score:3]
Figure S1 displays an alignment between miR169, miR172 and miR395 microRNAs and their target sequences. [score:3]
Predicted targets of miR169, miR172, and miR395. [score:3]
Although the expression difference of miR160, miR164 and miR319 between BTx623 and Rio was inherited in the F2, and thus of interest for further analysis, it was less than two fold; so we decided to focus on miR169, miR172 and miR395 instead. [score:3]
Targets of predicted for miR169, miR172 and miR395 microRNAs. [score:3]
Although miR169 and miR395 have known roles in drought stress and sulphur starvation, respectively [37, 38], our data suggested a possible function for these miRNAs in sugar accumulation and flowering time. [score:1]
[1 to 20 of 16 sentences]
2
[+] score: 12
Other miRNAs from this paper: sbi-MIR166d, sbi-MIR166c, sbi-MIR166b, sbi-MIR166a, sbi-MIR172a, sbi-MIR156a, sbi-MIR156c, sbi-MIR156b, sbi-MIR160d, sbi-MIR160a, sbi-MIR160c, sbi-MIR160b, sbi-MIR160e, sbi-MIR164a, sbi-MIR167a, sbi-MIR167b, sbi-MIR169b, sbi-MIR169a, sbi-MIR395b, sbi-MIR395a, sbi-MIR395d, sbi-MIR395e, sbi-MIR396b, sbi-MIR396a, sbi-MIR396c, sbi-MIR399a, sbi-MIR399c, sbi-MIR399d, sbi-MIR399e, sbi-MIR399f, sbi-MIR399b, sbi-MIR399g, sbi-MIR156d, sbi-MIR164b, sbi-MIR166e, sbi-MIR167d, sbi-MIR167f, sbi-MIR167g, sbi-MIR167e, sbi-MIR167c, sbi-MIR169c, sbi-MIR169d, sbi-MIR169f, sbi-MIR169g, sbi-MIR169i, sbi-MIR171b, sbi-MIR171d, sbi-MIR171a, sbi-MIR171c, sbi-MIR166f, sbi-MIR171e, sbi-MIR319a, sbi-MIR399h, sbi-MIR399i, sbi-MIR164c, sbi-MIR166g, sbi-MIR171f, sbi-MIR395f, sbi-MIR156e, sbi-MIR156f, sbi-MIR156g, sbi-MIR156h, sbi-MIR156i, sbi-MIR160f, sbi-MIR164d, sbi-MIR164e, sbi-MIR166h, sbi-MIR166i, sbi-MIR166j, sbi-MIR166k, sbi-MIR167h, sbi-MIR167i, sbi-MIR169e, sbi-MIR169h, sbi-MIR169j, sbi-MIR169k, sbi-MIR169m, sbi-MIR169n, sbi-MIR171g, sbi-MIR171h, sbi-MIR171i, sbi-MIR171j, sbi-MIR171k, sbi-MIR390, sbi-MIR395c, sbi-MIR395g, sbi-MIR395h, sbi-MIR395i, sbi-MIR395j, sbi-MIR395k, sbi-MIR395l, sbi-MIR396d, sbi-MIR396e, sbi-MIR399j, sbi-MIR437a, sbi-MIR437b, sbi-MIR437c, sbi-MIR437d, sbi-MIR437e, sbi-MIR437f, sbi-MIR437g, sbi-MIR437i, sbi-MIR437j, sbi-MIR437k, sbi-MIR437l, sbi-MIR437m, sbi-MIR437n, sbi-MIR437o, sbi-MIR437p, sbi-MIR437q, sbi-MIR437r, sbi-MIR437s, sbi-MIR437t, sbi-MIR437u, sbi-MIR437v, sbi-MIR437w, sbi-MIR529, sbi-MIR169o, sbi-MIR169p, sbi-MIR169q, sbi-MIR398, sbi-MIR399k, sbi-MIR5385, sbi-MIR5567, sbi-MIR5568a, sbi-MIR5568g, sbi-MIR5568b, sbi-MIR5568c, sbi-MIR6220, sbi-MIR437x, sbi-MIR6221, sbi-MIR6225, sbi-MIR5568d, sbi-MIR6230, sbi-MIR5568e, sbi-MIR5568f
Transgenic plants overexpressing miR169 and NFYA5 knockout plants exhibited hypersensitivity to drought stress. [score:4]
Li et al. (2008) reported that NFYA5 transcript is strongly induced by drought stress in an abscisic acid (ABA) -dependent manner, whereas miR169 was down-regulated by drought stress through an ABA -dependent pathway. [score:4]
Over -expression of microRNA169 confers enhanced drought tolerance to tomato. [score:2]
Chromosomal distribution (A) showed that the maximum numbers of miRNAs were predicted from chromosome 1 and 4. Distribution of conserved miRNAs (B) showed that miR169, miR166, and miR167 were the most abundant miRNAs in sorghum genome. [score:1]
Sorghum crop is highly tolerant to drought and heat stress, and the extension of MIR gene family members, including miR169 family, was suggested as one of the possible reasons for adaptation of sorghum to abiotic stresses (Paterson et al., 2009). [score:1]
[1 to 20 of 5 sentences]
3
[+] score: 5
For example, miR156 and miR529 were predicted to target genes that encode SBP-box transcription factors [58- 60], and miR164, miR169, miR171, miR172 and miR319 were reported to target No Apical Meristem (NAM) [61, 62], CCAAT -binding factor (CBF) [63, 64], GRAS transcription factor [65], APETALA2 Ethylene-Responsive Element Binding Proteins (AP2-EREBP) [66, 67] and Teosinite branched, Cycloidea, and PCF (TCP) [68, 69], respectively. [score:5]
[1 to 20 of 1 sentences]
4
[+] score: 2
Still 173s in PMRD (20) and only three mature (sbi-miR165, sbi-miR169l and sbi-miR157) sequences cannot be found in miRBase. [score:1]
We used the GMAP version 2015-11-20 (49) software map to try and identify the three precursor sequences in the sorghum genome, but only sbi-miR169l matched. [score:1]
[1 to 20 of 2 sentences]
5
[+] score: 1
Calvino and colleagues [191] have identified cluster of miRNA169 on chromosome 1 and another on chromosome 7. Chromosomal segments having miRNA169 clusters show significant synteny with the chromosomal segments carrying linked bHLH and CONSTANS-LIKE genes from both monocot and dicot species. [score:1]
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