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4 publications mentioning vvi-MIR845d

Open access articles that are associated with the species Vitis vinifera and mention the gene name MIR845d. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 4
miR845 was not found in any of our libraries, confirming previous papers [25] and miRBase findings that report a very faint expression of vvi-miR845a and vvi-miR845b. [score:3]
Seven grapevine miRNA known families (vvi-miR828, vvi-miR845, vvi-miR3626, vvi-miR3630, vvi-miR3631, vvi-miR3636 and vvi-miR3638), were not identified in our libraries. [score:1]
[1 to 20 of 2 sentences]
2
[+] score: 2
Mapping of the short tags onto the genome sequence revealed that of the 28 families predicted by our comparative analysis, 23 showed at least one sequence tag either in exact or very close correspondence to the position of one of the predicted mature sequences (the exceptions being miR395, miR396, miR477, miR828 and miR845). [score:1]
One family (miR403) is present in both of the previously sequenced Dicots, while two previously Arabidopsis-specific families (miR828 and miR845) were predicted in grapevine (suggesting their loss or - as yet - undetected presence in poplar), while miR479 and miR482 (annotated only in poplar and grapevine) are likely to have evolved in a common ancestor of these organisms after its divergence from the Arabidopsis lineage [26]. [score:1]
[1 to 20 of 2 sentences]
3
[+] score: 2
Other miRNAs from this paper: vvi-MIR156a, vvi-MIR156b, vvi-MIR156c, vvi-MIR156d, vvi-MIR156e, vvi-MIR156f, vvi-MIR156g, vvi-MIR156i, vvi-MIR159a, vvi-MIR159c, vvi-MIR160a, vvi-MIR160b, vvi-MIR160c, vvi-MIR160d, vvi-MIR160e, vvi-MIR162, vvi-MIR164a, vvi-MIR164b, vvi-MIR164c, vvi-MIR164d, vvi-MIR166a, vvi-MIR166b, vvi-MIR166c, vvi-MIR166d, vvi-MIR166e, vvi-MIR166f, vvi-MIR166g, vvi-MIR166h, vvi-MIR167a, vvi-MIR167b, vvi-MIR167c, vvi-MIR167d, vvi-MIR167e, vvi-MIR168, vvi-MIR169a, vvi-MIR169y, vvi-MIR169c, vvi-MIR169d, vvi-MIR169e, vvi-MIR169f, vvi-MIR169g, vvi-MIR169j, vvi-MIR169k, vvi-MIR169m, vvi-MIR169p, vvi-MIR169r, vvi-MIR169s, vvi-MIR169t, vvi-MIR169u, vvi-MIR171a, vvi-MIR171b, vvi-MIR171c, vvi-MIR171d, vvi-MIR171e, vvi-MIR171f, vvi-MIR171h, vvi-MIR171i, vvi-MIR172a, vvi-MIR172b, vvi-MIR172c, vvi-MIR172d, vvi-MIR319b, vvi-MIR319c, vvi-MIR319f, vvi-MIR319g, vvi-MIR393b, vvi-MIR394a, vvi-MIR394b, vvi-MIR395a, vvi-MIR395b, vvi-MIR395c, vvi-MIR395d, vvi-MIR395e, vvi-MIR395f, vvi-MIR395g, vvi-MIR395h, vvi-MIR395i, vvi-MIR395j, vvi-MIR395k, vvi-MIR395l, vvi-MIR395m, vvi-MIR396a, vvi-MIR396b, vvi-MIR396d, vvi-MIR398a, vvi-MIR399a, vvi-MIR399b, vvi-MIR399e, vvi-MIR399g, vvi-MIR399h, vvi-MIR408, vvi-MIR479, vvi-MIR535a, vvi-MIR535b, vvi-MIR535c, vvi-MIR156h, vvi-MIR169b, vvi-MIR169h, vvi-MIR169i, vvi-MIR169l, vvi-MIR169n, vvi-MIR169o, vvi-MIR169q, vvi-MIR169v, vvi-MIR169w, vvi-MIR169x, vvi-MIR171g, vvi-MIR319e, vvi-MIR393a, vvi-MIR394c, vvi-MIR395n, vvi-MIR396c, vvi-MIR397a, vvi-MIR398b, vvi-MIR398c, vvi-MIR399c, vvi-MIR399d, vvi-MIR399f, vvi-MIR399i, vvi-MIR403a, vvi-MIR403b, vvi-MIR403c, vvi-MIR403d, vvi-MIR403e, vvi-MIR403f, vvi-MIR477a, vvi-MIR482, vvi-MIR828a, vvi-MIR845a, vvi-MIR845b, vvi-MIR845c, vvi-MIR845e, vvi-MIR477b, vvi-MIR171j
One family (miR403) is present in both of the previously sequenced Dicots, while two previously Arabidopsis-specific families (miR828 and miR845) were predicted in grapevine (suggesting their loss or - as yet - undetected presence in poplar), while miR479 and miR482 (annotated only in poplar and grapevine) are likely to have evolved in a common ancestor of these organisms after its divergence from the Arabidopsis lineage [25]. [score:1]
Mapping of the short tags onto the genome sequence revealed that of the 28 families predicted by our comparative analysis, 22 showed at least one sequence tag either in exact or very close correspondence to the position of one of the predicted mature sequences (the exceptions being miR403, miR477, miR535, miR828, miR482 and miR845). [score:1]
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4
[+] score: 1
Nevertheless, vv-miR845 and vv-miR2111 in Vitis vinifera have no orthologs in Amur grape with vv-miR845 being unique to Vitis Vinifera, confirming the need for studies on Amur grape miRNAs for a comprehensive understanding of functions of miRNAs in vitis plants. [score:1]
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