| 1 |
[+]
score:
11
Other miRNAs from this paper: mmu-let-7g, mmu-let-7i, mmu-mir-15b, mmu-mir-101a, mmu-mir-124-3, mmu-mir-125b-2, mmu-mir-132, mmu-mir-145a, mmu-mir-150, mmu-mir-191, mmu-mir-193a, mmu-mir-199a-1, mmu-mir-143, mmu-mir-294, mmu-mir-295, mmu-mir-300, mmu-mir-34c, mmu-let-7d, mmu-mir-30c-1, mmu-mir-30c-2, mmu-mir-30d, mmu-mir-148a, mmu-let-7a-1, mmu-let-7a-2, mmu-let-7b, mmu-let-7c-1, mmu-let-7c-2, mmu-let-7e, mmu-let-7f-1, mmu-let-7f-2, mmu-mir-21a, mmu-mir-26a-1, mmu-mir-29a, mmu-mir-322, mmu-mir-351, mmu-mir-101b, mmu-mir-25, mmu-mir-212, mmu-mir-26a-2, mmu-mir-224, mmu-mir-199a-2, mmu-mir-124-1, mmu-mir-124-2, mmu-mir-125b-1, mmu-mir-7a-1, mmu-mir-7a-2, mmu-mir-470, mmu-mir-871, mmu-mir-880, mmu-mir-193b, mmu-mir-101c, mmu-mir-145b, mmu-mir-21b, mmu-let-7j, mmu-mir-21c, mmu-let-7k, mmu-mir-124b
Among the up-regulated miRNAs, mmu-mir-1298 had the highest fold change with 4.025 while mmu-mir-150 was down-regulated more than 3 fold.
[score:7]
Among the up-regulated miRNAs, mmu-mir-1298 had the highest fold change with 4.025 during 21d-P6 followed by mmu-mir-212 and mmu-mir-132 with a fold change of 3.71 and 3.28, respectively.
[score:4]
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| 2 |
[+]
score:
6
Three miRNAs were significantly overexpressed within infection: miR-146b, miR-1940, and miR-1298 (FDR P<0.05) (Figure S3).
[score:3]
By comparing miRNA profiles from C. difficile-infected and uninfected mice, we found that miR-146b, miR-1940, and miR-1298 were overexpressed in colons of C. difficile-infected mice.
[score:3]
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| 3 |
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score:
3
Other miRNAs from this paper: hsa-mir-448, mmu-mir-448, hsa-mir-483, hsa-mir-488, hsa-mir-502, mmu-mir-483, hsa-mir-1264, hsa-mir-1298, hsa-mir-764, mmu-mir-1264, mmu-mir-764, mmu-mir-488, mml-mir-448, mml-mir-488, mml-mir-502, hsa-mir-1911, hsa-mir-1912, mml-mir-764, mmu-mir-1912, hsa-mir-4728, mml-mir-1298, mml-mir-1911, mmu-mir-1911
Genomic mapping of HTR2C transcripts (NM_000868, NM_001256760 and NM_001256761) and their six intragenic miRNAs (miR-1912, miR-764, miR-1264, miR-1298, miR-1911 and miR-488) as well as the expression correlation between HTR2C and these miRNAs.
[score:3]
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| 4 |
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score:
1
Other miRNAs from this paper: hsa-mir-21, mmu-mir-140, hsa-mir-208a, hsa-mir-10a, hsa-mir-221, hsa-mir-222, hsa-mir-140, mmu-mir-208a, mmu-mir-21a, mmu-mir-10a, mmu-mir-221, mmu-mir-222, hsa-mir-548a-1, hsa-mir-548b, hsa-mir-548a-2, hsa-mir-548a-3, hsa-mir-548c, hsa-mir-548d-1, hsa-mir-548d-2, hsa-mir-1298, mmu-mir-708, hsa-mir-708, hsa-mir-548e, hsa-mir-548j, hsa-mir-548k, hsa-mir-548l, hsa-mir-548f-1, hsa-mir-548f-2, hsa-mir-548f-3, hsa-mir-548f-4, hsa-mir-548f-5, hsa-mir-548g, hsa-mir-548n, hsa-mir-548m, hsa-mir-548o, hsa-mir-1272, hsa-mir-548h-1, hsa-mir-548h-2, hsa-mir-548h-3, hsa-mir-548h-4, hsa-mir-548p, hsa-mir-548i-1, hsa-mir-548i-2, hsa-mir-548i-3, hsa-mir-548i-4, hsa-mir-548q, hsa-mir-548s, hsa-mir-548t, hsa-mir-548u, hsa-mir-548v, hsa-mir-548w, hsa-mir-548x, hsa-mir-548y, hsa-mir-548z, hsa-mir-548aa-1, hsa-mir-548aa-2, hsa-mir-548o-2, hsa-mir-548h-5, hsa-mir-548ab, hsa-mir-548ac, hsa-mir-548ad, hsa-mir-548ae-1, hsa-mir-548ae-2, hsa-mir-548ag-1, hsa-mir-548ag-2, hsa-mir-548ah, hsa-mir-548ai, hsa-mir-548aj-1, hsa-mir-548aj-2, hsa-mir-548x-2, hsa-mir-548ak, hsa-mir-548al, hsa-mir-548am, hsa-mir-548an, hsa-mir-548ao, hsa-mir-548ap, hsa-mir-548aq, hsa-mir-548ar, hsa-mir-548as, hsa-mir-548at, hsa-mir-548au, hsa-mir-548av, hsa-mir-548aw, hsa-mir-548ax, mmu-mir-21b, mmu-mir-21c, hsa-mir-548ay, hsa-mir-548az, hsa-mir-548ba, hsa-mir-548bb, hsa-mir-548bc
MiRNAs miR-1272, miR-548, miR-208a, miR-1298, miR-708 and miR140-3p were predicted to bind to the CD38 3’UTR with high context score.
[score:1]
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