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6 publications mentioning ptc-MIR160g

Open access articles that are associated with the species Populus trichocarpa and mention the gene name MIR160g. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

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[+] score: 43
For instance, the targets of miR156 and miR160 were genes encoding squamosa promoter -binding (SPB) proteins; the target genes of miR166 encoded a homeodomain-leucine zipper protein (HD-ZIP); and miR159, miR164, and miR319 targeted myeloblastic leukemia (MYB) factors. [score:7]
For example, expression of miR156, miR160, miR164, miR166, miR168, miR398, and miR408 increases while miR159 shows reduced expression after UV-B radiation in P. tremula [10]. [score:5]
Auxin signal transduction is related to bacterial disease resistance in Arabidopsis [14], and this study indicated that miR160, miR167, and miR164 are tightly related to plant disease resistance. [score:5]
The targets of miR156 and miR160 were genes encoding ARF, whereas miR164 and miR166 both targeted NAC domain proteins. [score:5]
Plants always regulate disease defense through phytohormone signal transduction [54], and several miRNAs (miR159, miR160, miR164, and miR167) were induced by phytohormones [55], [56]. [score:4]
The miRNAs detected in 14 reactions were upregulated at 3, 5, and 7 DAI in P. trichocarpa, with two exceptions: miR398 and miR160 at 3 DAI. [score:4]
MiR156, miR159, miR160, miR164, miR168, miR172, and miR408 are significantly expressed in tension- and compression-stressed developing xylem of P. trichocarpa [12], and miR156, miR160, miR164, and miR168 also respond to cold stress in P. trichocarpa [4]. [score:3]
Group II contained miR156, miR160, miR164, miR1448, miR398, miR408, and three members of miR166; expression of these miRNAs was always higher at 5 DAI than that at 3 or 7 DAI. [score:3]
In total, 15 qPCR validation reactions (designed for detecting the expression of miR156, miR159, miR160, miR164, miR166, miR168, miR172, miR319, miR398, miR408, miR1448, and miR1450) for the 41 fungi-response miRNAs tested were carried out. [score:3]
Using bioinformatics analysis, two feedback regulatory network of miR160-ARF (Auxin receptor factor) and miR167-ARF interaction was found in Arabidopsis [57]. [score:2]
Among these miRNAs, several also respond to pathogenic fungi in other plants, for example, miR156, miR159, miR160, and miR319 in galled loblolly pine stem infected with C. quercuum f. sp. [score:1]
These probes belong to 12 miRNA families (miR156, miR159, miR160, miR164, miR166, miR168, miR172, miR319, miR398, miR408, miR1448, and miR1450) and account for 17.52% of the 234 probes. [score:1]
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2
[+] score: 12
Other miRNAs from this paper: ptc-MIR159a, ptc-MIR159b, ptc-MIR159d, ptc-MIR159e, ptc-MIR159c, ptc-MIR160a, ptc-MIR160b, ptc-MIR160c, ptc-MIR160d, ptc-MIR160e, ptc-MIR160f, ptc-MIR160h, ptc-MIR164a, ptc-MIR164b, ptc-MIR164c, ptc-MIR164d, ptc-MIR164e, ptc-MIR164f, ptc-MIR167a, ptc-MIR167b, ptc-MIR167c, ptc-MIR167d, ptc-MIR167e, ptc-MIR167f, ptc-MIR167g, ptc-MIR167h, ptc-MIR168a, ptc-MIR168b, ptc-MIR169a, ptc-MIR169aa, ptc-MIR169ab, ptc-MIR169ac, ptc-MIR169ad, ptc-MIR169ae, ptc-MIR169af, ptc-MIR169b, ptc-MIR169c, ptc-MIR169d, ptc-MIR169e, ptc-MIR169f, ptc-MIR169g, ptc-MIR169h, ptc-MIR169i, ptc-MIR169j, ptc-MIR169k, ptc-MIR169l, ptc-MIR169m, ptc-MIR169n, ptc-MIR169o, ptc-MIR169p, ptc-MIR169q, ptc-MIR169r, ptc-MIR169s, ptc-MIR169t, ptc-MIR169u, ptc-MIR169v, ptc-MIR169w, ptc-MIR169x, ptc-MIR169y, ptc-MIR169z, ptc-MIR171a, ptc-MIR171b, ptc-MIR171c, ptc-MIR171d, ptc-MIR171e, ptc-MIR171f, ptc-MIR171g, ptc-MIR171h, ptc-MIR171i, ptc-MIR390a, ptc-MIR390b, ptc-MIR390c, ptc-MIR390d, ptc-MIR394a, ptc-MIR394b, ptc-MIR395a, ptc-MIR395b, ptc-MIR395c, ptc-MIR395d, ptc-MIR395e, ptc-MIR395f, ptc-MIR395g, ptc-MIR395h, ptc-MIR395i, ptc-MIR395j, ptc-MIR396a, ptc-MIR396b, ptc-MIR396c, ptc-MIR396d, ptc-MIR396e, ptc-MIR396f, ptc-MIR396g, ptc-MIR398a, ptc-MIR403a, ptc-MIR408, ptc-MIR472a, ptc-MIR472b, ptc-MIR482a, ptc-MIR171k, ptc-MIR171l, ptc-MIR171m, ptc-MIR171j, ptc-MIR1444a, ptc-MIR1444b, ptc-MIR1444c, ptc-MIR1446a, ptc-MIR482d, ptc-MIR169ag, ptc-MIR482b, ptc-MIR395k, ptc-MIR482c, ptc-MIR1444d, ptc-MIR1444e
The two downregulated miRNAs (miR160 and miR164) were both identified to be cold-responsive miRNAs in P. trichocarpa [25]. [score:4]
Three auxin responsive factor (ARF) genes (ARF10, ARF16, and ARF17) are the targets of miR160 [55]. [score:3]
The regulatory direction of four miRNAs (miR160, miR472, miR473 and miR408) was identical in P. tomentosa and our research, which might be due to their close genetic relationship. [score:3]
Repression of ARF10 by miR160 is critical for the seed germination and post-germination stages [56]. [score:1]
TMV-Cg virus infection in Arabidopsis causes the accumulation of miR160 and miR164 [54]. [score:1]
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3
[+] score: 8
Target sequences for miR160 have been detected in PoptrARF10.1- 10.2, PoptrARF16.1–16.5 and PoptrARF17.1–17.2 and miR167 targets have been found in PoptrARF6.1–6.3 and PoptrARF8.1–8.2. [score:5]
AtARF 10, 16 and 17 are known to be regulated by miR160, a miRNA group that is highly conserved across the plant kingdom [45, 46] and AtARF6 and AtARF8 have shown to be regulated by miR167 [47]. [score:3]
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[+] score: 5
Two target mimics (lincRNA432 and lincRNA1174) for miR160 were also identified in Populus, which were conserved with the 13 endogenous target mimics identified by Wu et al. (2013) in Arabidopsis and rice. [score:5]
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5
[+] score: 3
Other miRNAs from this paper: ptc-MIR156a, ptc-MIR156b, ptc-MIR156c, ptc-MIR156d, ptc-MIR156e, ptc-MIR156f, ptc-MIR156g, ptc-MIR156h, ptc-MIR156i, ptc-MIR156j, ptc-MIR156k, ptc-MIR159a, ptc-MIR159b, ptc-MIR159d, ptc-MIR159e, ptc-MIR159c, ptc-MIR160a, ptc-MIR160b, ptc-MIR160c, ptc-MIR160d, ptc-MIR160e, ptc-MIR160f, ptc-MIR160h, ptc-MIR164a, ptc-MIR164b, ptc-MIR164c, ptc-MIR164d, ptc-MIR164e, ptc-MIR164f, ptc-MIR166a, ptc-MIR166b, ptc-MIR166c, ptc-MIR166d, ptc-MIR166e, ptc-MIR166f, ptc-MIR166g, ptc-MIR166h, ptc-MIR166i, ptc-MIR166j, ptc-MIR166k, ptc-MIR166l, ptc-MIR166m, ptc-MIR166n, ptc-MIR166o, ptc-MIR166p, ptc-MIR166q, ptc-MIR167a, ptc-MIR167b, ptc-MIR167c, ptc-MIR167d, ptc-MIR167e, ptc-MIR167f, ptc-MIR167g, ptc-MIR167h, ptc-MIR169a, ptc-MIR169aa, ptc-MIR169ab, ptc-MIR169ac, ptc-MIR169ad, ptc-MIR169ae, ptc-MIR169af, ptc-MIR169b, ptc-MIR169c, ptc-MIR169d, ptc-MIR169e, ptc-MIR169f, ptc-MIR169g, ptc-MIR169h, ptc-MIR169i, ptc-MIR169j, ptc-MIR169k, ptc-MIR169l, ptc-MIR169m, ptc-MIR169n, ptc-MIR169o, ptc-MIR169p, ptc-MIR169q, ptc-MIR169r, ptc-MIR169s, ptc-MIR169t, ptc-MIR169u, ptc-MIR169v, ptc-MIR169w, ptc-MIR169x, ptc-MIR169y, ptc-MIR169z, ptc-MIR172a, ptc-MIR172b, ptc-MIR172c, ptc-MIR172d, ptc-MIR172e, ptc-MIR172f, ptc-MIR172g, ptc-MIR172h, ptc-MIR172i, ptc-MIR319a, ptc-MIR319b, ptc-MIR319c, ptc-MIR319d, ptc-MIR319e, ptc-MIR319f, ptc-MIR319g, ptc-MIR319h, ptc-MIR319i, ptc-MIR396a, ptc-MIR396b, ptc-MIR396c, ptc-MIR396d, ptc-MIR396e, ptc-MIR396f, ptc-MIR396g, ptc-MIR397a, ptc-MIR397b, ptc-MIR397c, ptc-MIR472a, ptc-MIR472b, ptc-MIR1447, ptc-MIR6459a, ptc-MIR6462a, ptc-MIR6462b, ptc-MIR6462c, ptc-MIR6462d, ptc-MIR156l, ptc-MIR169ag, ptc-MIR6462e, ptc-MIR6462f, ptc-MIR6459b
miR167 and miR160 are thought to control transcription in response to the phytohormone auxin by targeting mRNAs coding for ARF DNA -binding proteins [30], [31]. [score:3]
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[+] score: 1
Other miRNAs from this paper: ptc-MIR156a, ptc-MIR156b, ptc-MIR156c, ptc-MIR156d, ptc-MIR156e, ptc-MIR156f, ptc-MIR156g, ptc-MIR156h, ptc-MIR156i, ptc-MIR156j, ptc-MIR156k, ptc-MIR159a, ptc-MIR159b, ptc-MIR159d, ptc-MIR159e, ptc-MIR159c, ptc-MIR160a, ptc-MIR160b, ptc-MIR160c, ptc-MIR160d, ptc-MIR160e, ptc-MIR160f, ptc-MIR160h, ptc-MIR164a, ptc-MIR164b, ptc-MIR164c, ptc-MIR164d, ptc-MIR164e, ptc-MIR164f, ptc-MIR166a, ptc-MIR166b, ptc-MIR166c, ptc-MIR166d, ptc-MIR166e, ptc-MIR166f, ptc-MIR166g, ptc-MIR166h, ptc-MIR166i, ptc-MIR166j, ptc-MIR166k, ptc-MIR166l, ptc-MIR166m, ptc-MIR166n, ptc-MIR166o, ptc-MIR166p, ptc-MIR166q, ptc-MIR167a, ptc-MIR167b, ptc-MIR167c, ptc-MIR167d, ptc-MIR167e, ptc-MIR167f, ptc-MIR167g, ptc-MIR167h, ptc-MIR169a, ptc-MIR169aa, ptc-MIR169ab, ptc-MIR169ac, ptc-MIR169ad, ptc-MIR169ae, ptc-MIR169af, ptc-MIR169b, ptc-MIR169c, ptc-MIR169d, ptc-MIR169e, ptc-MIR169f, ptc-MIR169g, ptc-MIR169h, ptc-MIR169i, ptc-MIR169j, ptc-MIR169k, ptc-MIR169l, ptc-MIR169m, ptc-MIR169n, ptc-MIR169o, ptc-MIR169p, ptc-MIR169q, ptc-MIR169r, ptc-MIR169s, ptc-MIR169t, ptc-MIR169u, ptc-MIR169v, ptc-MIR169w, ptc-MIR169x, ptc-MIR169y, ptc-MIR169z, ptc-MIR171a, ptc-MIR171b, ptc-MIR171c, ptc-MIR171d, ptc-MIR171e, ptc-MIR171f, ptc-MIR171g, ptc-MIR171h, ptc-MIR171i, ptc-MIR172a, ptc-MIR172b, ptc-MIR172c, ptc-MIR172d, ptc-MIR172e, ptc-MIR172f, ptc-MIR172g, ptc-MIR172h, ptc-MIR172i, ptc-MIR319a, ptc-MIR319b, ptc-MIR319c, ptc-MIR319d, ptc-MIR319e, ptc-MIR319f, ptc-MIR319g, ptc-MIR319h, ptc-MIR319i, ptc-MIR390a, ptc-MIR390b, ptc-MIR390c, ptc-MIR390d, ptc-MIR393a, ptc-MIR393b, ptc-MIR393c, ptc-MIR395a, ptc-MIR395b, ptc-MIR395c, ptc-MIR395d, ptc-MIR395e, ptc-MIR395f, ptc-MIR395g, ptc-MIR395h, ptc-MIR395i, ptc-MIR395j, ptc-MIR396a, ptc-MIR396b, ptc-MIR396c, ptc-MIR396d, ptc-MIR396e, ptc-MIR396f, ptc-MIR396g, ptc-MIR398a, ptc-MIR398b, ptc-MIR398c, ptc-MIR171k, ptc-MIR171l, ptc-MIR171m, ptc-MIR171j, ptc-MIR1446a, ptc-MIR1446b, ptc-MIR1446c, ptc-MIR1446d, ptc-MIR1446e, ppe-MIR171f, ppe-MIR171h, ppe-MIR171a, ppe-MIR171e, ppe-MIR169e, ppe-MIR398a, ppe-MIR319a, ppe-MIR319b, ppe-MIR171g, ppe-MIR171b, ppe-MIR171c, ppe-MIR398b, ptc-MIR3627a, ptc-MIR156l, ptc-MIR169ag, ptc-MIR395k, ptc-MIR3627b, ppe-MIR156a, ppe-MIR156b, ppe-MIR156c, ppe-MIR156d, ppe-MIR156e, ppe-MIR156f, ppe-MIR156g, ppe-MIR156h, ppe-MIR156i, ppe-MIR159, ppe-MIR160a, ppe-MIR160b, ppe-MIR164a, ppe-MIR164b, ppe-MIR164c, ppe-MIR164d, ppe-MIR166a, ppe-MIR166b, ppe-MIR166c, ppe-MIR166d, ppe-MIR166e, ppe-MIR167a, ppe-MIR167b, ppe-MIR167c, ppe-MIR167d, ppe-MIR169a, ppe-MIR169b, ppe-MIR169c, ppe-MIR169d, ppe-MIR169f, ppe-MIR169g, ppe-MIR169h, ppe-MIR169i, ppe-MIR169j, ppe-MIR169k, ppe-MIR169l, ppe-MIR171d, ppe-MIR172a, ppe-MIR172b, ppe-MIR172c, ppe-MIR172d, ppe-MIR390, ppe-MIR393a, ppe-MIR393b, ppe-MIR395a, ppe-MIR395b, ppe-MIR395c, ppe-MIR395d, ppe-MIR395e, ppe-MIR395f, ppe-MIR395g, ppe-MIR395h, ppe-MIR395i, ppe-MIR395j, ppe-MIR395k, ppe-MIR395l, ppe-MIR395m, ppe-MIR395n, ppe-MIR395o, ppe-MIR396a, ppe-MIR396b, ppe-MIR3627
Most of conserved families common to Arabidopsis and peach (miR156, miR159, miR160, miR164, miR166, miR171, miR172, miR319, miR390, miR395, and miR396) did not show significant size variation (Figure 4). [score:1]
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