Stem-loop stu-MIR171e

Accession

MI0025989

Description

Solanum tuberosum stu-MIR171e precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

6 open access papers mention stu-MIR171e
(33 sentences)

Sequence

uguuggugugguucaauuagauaacaaucuccacauaagauuauagaguuuguuauuUGAUUGAGCCGUGCCAAUAUC
(((((((((((((((((((((((((((.(((...(((....))).))).)))))))))))))))))))))))))))..

Structure

--                           u   cac   a 
  uguuggugugguucaauuagauaacaa cuc   aua g
  ||||||||||||||||||||||||||| |||   |||  
  AUAACCGUGCCGAGUUAGUuuauuguu gag   uau a
CU                           u   --a   u 

Annotation confidence Not enough data

Genome context

JH138336.1: 218276-218353 [-]

Mature stu-miR171e

• Accession: MIMAT0031345
• Description: Solanum tuberosum stu-miR171e mature miRNA
• Sequence: 58 - UGAUUGAGCCGUGCCAAUAUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233