Stem-loop stu-MIR477a

Accession

MI0025979

Description

Solanum tuberosum stu-MIR477a precursor miRNA

Sequence

CCUCUCCCUCAAGGGCUUCUCuccugcaugcuuauauguugggaaaGAAGCUCUAGCAGGGAGAGCCA
.(((((((((.(((((((((.(((((((((....)))).))))).))))))))).).))))))))...

Structure

--C        - A         C     -    c 
   CUCUCCCU C AGGGCUUCU uccug caug u
   |||||||| | ||||||||| ||||| ||||  
   GAGAGGGA G UCUCGAAGa agggu guau u
ACC        C A         a     u    a 

Annotation confidence Not enough data

Genome context

JH137800.1: 3232100-3232167 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from stu-MIR477a

Mature stu-miR477a-5p

• Accession: MIMAT0031326
• Description: Solanum tuberosum stu-miR477a-5p mature miRNA
• Sequence: 1 - CCUCUCCCUCAAGGGCUUCUC - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR477a-3p

• Accession: MIMAT0031327
• Description: Solanum tuberosum stu-miR477a-3p mature miRNA
• Sequence: 47 - GAAGCUCUAGCAGGGAGAGCCA - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233