Stem-loop stu-MIR171d

Accession

MI0025966

Description

Solanum tuberosum stu-MIR171d precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

7 open access papers mention stu-MIR171d
(36 sentences)

Sequence

AGAUAUUGGUGCGGUUCAAUUagaaagcacacuucuuuauauauagaacuucguuauuuaaUUGAGCCGUGCCAAUAUCACG
.(((((((((((((((((((((((.(((....((((........))))....))).)))))))))))))))))))))))...

Structure

--A                       a   acac    uua 
   GAUAUUGGUGCGGUUCAAUUaga agc    uucu   u
   ||||||||||||||||||||||| |||    ||||    
   CUAUAACCGUGCCGAGUUaauuu uug    aaga   a
GCA                       a   cuuc    uau 

Annotation confidence Not enough data

Genome context

JH137887.1: 1016160-1016241 [-]

Mature stu-miR171d-5p

• Accession: MIMAT0031301
• Description: Solanum tuberosum stu-miR171d-5p mature miRNA
• Sequence: 1 - AGAUAUUGGUGCGGUUCAAUU - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR171d-3p

• Accession: MIMAT0031302
• Description: Solanum tuberosum stu-miR171d-3p mature miRNA
• Sequence: 62 - UUGAGCCGUGCCAAUAUCACG - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233