Stem-loop sequence stu-MIR156a

AccessionMI0025962 (change log)
DescriptionSolanum tuberosum miR156a stem-loop
Gene family MIPF0000008; MIR156
Literature search

9 open access papers mention stu-MIR156a
(23 sentences)

Stem-loop 
   --u          -             u  -   a     u  aa 
5'    ugacagaaga uagagagcacaga ga uaa gugca gg  a
      |||||||||| ||||||||||||| || ||| ||||| ||   
3'    acugucuucu auuucucguguuu cu auu cacgu cu  u
   acu          u             c  c   c     -  gu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (SolTub3.0; GCA_000226075.1) Overlapping transcripts
JH137878.1: 427242-427328 [-]
intergenic
Clustered miRNAs
< 10kb from stu-MIR156a
stu-MIR156aJH137878.1: 427242-427328 [-]
stu-MIR156bJH137878.1: 425005-425091 [-]
Database links

Mature sequence stu-miR156a

Accession MIMAT0031296
Sequence

1 -  

uugacagaagauagagagcac

 - 21

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Evidence experimental; Illumina [1]

References

1
PMID:23437348 "Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing" Zhang R, Marshall D, Bryan GJ, Hornyik C PLoS One. 8:e57233(2013).