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miRBase |
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Stem-loop sequence stu-MIR172c |
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Accession | MI0025958 (change log) | ||||
Description | Solanum tuberosum miR172c stem-loop | ||||
Gene family | MIPF0000035; MIR172 | ||||
Literature search |
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10 open access papers mention stu-MIR172c | ||||
Stem-loop |
-- u a gauuuau au ccacg - ug ag a 5' agcauc ucaagauuc caua auaau auagaguu auggg g aa ugauuaauua u |||||| ||||||||| |||| ||||| |||||||| ||||| | || |||||||||| 3' ucguag aguucuaag gugu uauua uaucucgg uaucc c uu auuaauuaau a cg u a -aguuuu au uuaua u gu -a u |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence stu-miR172c-5p |
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Accession | MIMAT0031288 |
Sequence |
1 - agcaucuucaagauucaca - 19 |
Evidence | experimental; Illumina [1] |
Mature sequence stu-miR172c-3p |
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Accession | MIMAT0031289 |
Sequence |
127 - agaaucuugaugaugcugc - 145 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:23437348
"Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing"
PLoS One. 8:e57233(2013).
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