Stem-loop stu-MIR1919

Accession

MI0025886

Description

Solanum tuberosum stu-MIR1919 precursor miRNA

Gene family

MIPF0000582; MIR1919

Sequence

UGUCGCAGAUGACUUUCGCCCuucucauucagccccuuucucuaaaucuaauuaauuugauuucaaugugguaggACGAGAGUCAUCUGUGACAGG
((((((((((((((((((.(((((.((((..............(((((..........))))).)))).)).))).))))))))))))))))))..

Structure

--                  C   -  u    cagccccuuucucu     uaau 
  UGUCGCAGAUGACUUUCG CCu uc cauu              aaauc    u
  |||||||||||||||||| ||| || ||||              |||||     
  ACAGUGUCUACUGAGAGC gga gg guaa              uuuag    a
GG                  A   u  u    -------------c     uuua 

Annotation confidence Not enough data

Genome context

JH138382.1: 101946-102041 [-]

Mature stu-miR1919-5p

• Accession: MIMAT0030977
• Description: Solanum tuberosum stu-miR1919-5p mature miRNA
• Sequence: 1 - UGUCGCAGAUGACUUUCGCCC - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR1919-3p

• Accession: MIMAT0031239
• Description: Solanum tuberosum stu-miR1919-3p mature miRNA
• Sequence: 76 - ACGAGAGUCAUCUGUGACAGG - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233