Stem-loop stu-MIR8049

Accession

MI0025884

Description

Solanum tuberosum stu-MIR8049 precursor miRNA

Sequence

CAAGGCUCAUGCAGACAUGCAcuagagauauguauguguguguguaauaucucuagugCAUGUCUACAUGAGCCUGAUA
..(((((((((.(((((((((((((((((((.(((......)))..))))))))))))))))))).)))))))))....

Structure

--CA         C                   -g   gu 
    AGGCUCAUG AGACAUGCAcuagagauau  uau  g
    ||||||||| |||||||||||||||||||  |||   
    UCCGAGUAC UCUGUACgugaucucuaua  gug  u
AUAG         A                   au   ug 

Annotation confidence Not enough data

Genome context

JH138095.1: 329885-329963 [+]

Mature stu-miR8049-5p

• Accession: MIMAT0030975
• Description: Solanum tuberosum stu-miR8049-5p mature miRNA
• Sequence: 1 - CAAGGCUCAUGCAGACAUGCA - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR8049-3p

• Accession: MIMAT0031237
• Description: Solanum tuberosum stu-miR8049-3p mature miRNA
• Sequence: 59 - CAUGUCUACAUGAGCCUGAUA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233