miRBase entry: stu-MIR8011b

Stem-loop stu-MIR8011b


Accession
MI0025859
Description
Solanum tuberosum stu-MIR8011b precursor miRNA

Literature search
1 open access papers mention stu-MIR8011b
(1 sentences)

Sequence

ACUCAUUUUUGUCUCACAAAAAaauaaacccaaaaguguaagauuugagucuacuuuUUCGUGAGACAAAAAGAAGCCU
.((..((((((((((((.(((((.((.((.((((.........)))).)).)).))))).))))))))))))..))...

Structure
--A  CA            A     a  a  c    agu 
   CU  UUUUUGUCUCAC AAAAa ua ac caaa   g
   ||  |||||||||||| ||||| || || ||||   u
   GA  AAAAACAGAGUG UUuuu au ug guuu   a
UCC  AG            C     c  c  a    aga 


Annotation confidence Not enough data
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Genome context
JH138056.1: 287593-287671 [+]

Database links

Mature stu-miR8011b-5p

Accession MIMAT0031218
Description Solanum tuberosum stu-miR8011b-5p mature miRNA
Sequence 1 - ACUCAUUUUUGUCUCACAAAAA - 22
Evidence experimental
Illumina [1]

Mature stu-miR8011b-3p

Accession MIMAT0030950
Description Solanum tuberosum stu-miR8011b-3p mature miRNA
Sequence 58 - UUCGUGAGACAAAAAGAAGCCU - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233