Stem-loop sequence stu-MIR8011b

Accession

MI0025859 (change log)

Description

Solanum tuberosum miR8011b stem-loop

Literature search

1 open access papers mention stu-MIR8011b
(1 sentences)

Stem-loop

   --a  ca            a     a  a  c    agu 
5'    cu  uuuuugucucac aaaaa ua ac caaa   g
      ||  |||||||||||| ||||| || || ||||   u
3'    ga  aaaaacagagug uuuuu au ug guuu   a
   ucc  ag            c     c  c  a    aga 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (SolTub3.0; GCA_000226075.1): JH138056.1: 287593-287671 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0025859

Mature sequence stu-miR8011b-5p

• Accession: MIMAT0031218
• Sequence: 1 - acucauuuuugucucacaaaaa - 22
• Evidence: experimental; Illumina [1]

Mature sequence stu-miR8011b-3p

• Accession: MIMAT0030950
• Sequence: 58 - uucgugagacaaaaagaagccu - 79
• Evidence: experimental; Illumina [1]

References

1. PMID:23437348 "Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing" Zhang R, Marshall D, Bryan GJ, Hornyik C PLoS One. 8:e57233(2013).