Stem-loop sequence stu-MIR1886i

Accession

MI0025834 (change log)

Description

Solanum tuberosum miR1886i stem-loop

Gene family

MIPF0001647; MIR1886

Literature search

1 open access papers mention stu-MIR1886i
(1 sentences)

Stem-loop

   --                  uu    a 
5'   augagaugaaauuagcgu  ggau u
     ||||||||||||||||||  |||| g
3'   uacucuacuuuaguugca  uuua c
   ag                  -u    g 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (SolTub3.0; GCA_000226075.1): JH138128.1: 40008-40061 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0025834

Mature sequence stu-miR1886i-5p

• Accession: MIMAT0030925
• Sequence: 1 - augagaugaaauuagcguuuggau - 24
• Evidence: experimental; Illumina [1]

Mature sequence stu-miR1886i-3p

• Accession: MIMAT0031202
• Sequence: 32 - uuuacguugauuucaucucauga - 54
• Evidence: experimental; Illumina [1]

References

1. PMID:23437348 "Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing" Zhang R, Marshall D, Bryan GJ, Hornyik C PLoS One. 8:e57233(2013).