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miRBase |
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Stem-loop sequence stu-MIR8007b |
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Accession | MI0025820 (change log) | ||||
Description | Solanum tuberosum miR8007b stem-loop | ||||
Gene family | MIPF0001839; MIR8007 | ||||
Literature search |
2 open access papers mention stu-MIR8007b | ||||
Stem-loop |
-- ac aa u a c uc ua - -ac uuaau gug uu --c guacuu u 5' augug acuuuuug uuucgaga ucaaaca gu ua uuugaccg aauuu uucau aucuuu auuuu uug guga uuaua uuuaug a ||||| |||||||| |||||||| ||||||| || || |||||||| ||||| ||||| |||||| ||||| ||| |||| ||||| |||||| g 3' uacac ugaaaagu aaagcucu aguuugu ca au aaacuggc uuaaa gggua uagaaa uaaaa aac uacu aauau aaauau u aa ca aa c - a uc ua u cau ----u --a uu uua ----au u |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence stu-miR8007b-5p |
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Accession | MIMAT0030911 |
Sequence |
1 - augugacacuuuuugaauuucgag - 24 |
Evidence | experimental; Illumina [1] |
Mature sequence stu-miR8007b-3p |
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Accession | MIMAT0031197 |
Sequence |
195 - cgaaaaaugaaaaguaccacauaa - 218 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:23437348
"Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing"
PLoS One. 8:e57233(2013).
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