Stem-loop stu-MIR7998

Accession

MI0025797

Description

Solanum tuberosum stu-MIR7998 precursor miRNA

Sequence

uguagacugaucuauggacuguaauccgucaauugaagcugggaggugucuauuguugaaguugaaagaauggcaaaguccugagucacagaagggaccuACGGACCGUAGAUCAAUCCACAGU
(((.((.((((((((((.(((((.(((.(...(((..(((((((..((.(((((.((........)).)))))))...)))).)))..))).).)))..))))).)))))))))).)).)))..

Structure

--   a  c          a     -a   g caa   aa   -    -gg  u     g  gaa 
  ugu ga ugaucuaugg cugua  ucc u   uug  gcu ggga   ug cuauu uu   g
  ||| || |||||||||| |||||  ||| |   |||  ||| ||||   || ||||| ||    
  ACA CU ACUAGAUGCC GGCAu  agg a   gac  uga uccu   ac gguaa aa   u
UG   C  A          A     cc   g --a   ac   g    gaa  -     g  agu 

Annotation confidence Not enough data

Genome context

JH137796.1: 1579223-1579346 [+]

Mature stu-miR7998

• Accession: MIMAT0030888
• Description: Solanum tuberosum stu-miR7998 mature miRNA
• Sequence: 101 - ACGGACCGUAGAUCAAUCCACAGU - 124
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233