Stem-loop sequence stu-MIR7996c

Accession

MI0025793 (change log)

Description

Solanum tuberosum miR7996c stem-loop

Gene family

MIPF0001691; MIR7996

Literature search

1 open access papers mention stu-MIR7996c
(1 sentences)

Stem-loop

   --          u         g   --     c        ---     g         auuu   g   c        u  -    ag         u 
5'   augugguaca augaaauuu aaa  uuaau aauuuuuu   aguuu uuuuuauau    uaa uug uaauuauu gu auuu  aguauguuu a
     |||||||||| ||||||||| |||  ||||| ||||||||   ||||| |||||||||    ||| ||| |||||||| || ||||  ||||||||| c
3'   uacacuaugu uacuuuaaa uuu  aguua uuaaaaaa   ucaaa aaaaauaua    auu aac auuaauaa ca uaaa  uuauauaaa g
   aa          u         g   uc     c        uau     a         ----   g   a        -  c    ga         u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (SolTub3.0; GCA_000226075.1): JH138313.1: 61352-61541 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0025793

Mature sequence stu-miR7996c

• Accession: MIMAT0030884
• Sequence: 1 - augugguacauaugaaauuugaaa - 24
• Evidence: experimental; Illumina [1]

References

1. PMID:23437348 "Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing" Zhang R, Marshall D, Bryan GJ, Hornyik C PLoS One. 8:e57233(2013).