Stem-loop sequence hsa-mir-6511a-2

Accession

MI0023564 (change log)

Symbol

HGNC:MIR6511A2

Description

Homo sapiens miR-6511a-2 stem-loop

Gene family

MIPF0001382; mir-6511

Stem-loop

   c             u   -gc   ca    agag 
5'  cugcaggcagaag ggg   uga  gggc    g
    ||||||||||||| |||   |||  ||||     
3'  gacguccgucuuc ccu   acu  cccg    g
   -             -   acc   cc    cguu 

Deep sequencing

2203 reads, 3.33 reads per million, 120 experiments

Confidence

Annotation confidence: high

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr16: 16324588-16324654 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from hsa-mir-6511a-2

• hsa-mir-6511a-2: chr16: 16324588-16324654 [+]
• hsa-mir-6770-2: chr16: 16329305-16329364 [+]

Database links

• HGNC:MIR6511A2
• RNAcentral:URS000075BCEB_9606
• miRBase Tracker:MI0023564

Mature sequence hsa-miR-6511a-5p

• Accession: MIMAT0025478
• Sequence: 5 - caggcagaaguggggcugacagg - 27
• Deep sequencing: 1940 reads, 68 experiments
• Evidence: experimental; Illumina [1-2]
• Database links:
  • RNAcentral:URS000075C82B_9606
• Predicted targets:
  • TargetScanVert:hsa-miR-6511a-5p
  • miRDB:hsa-miR-6511a-5p

Mature sequence hsa-miR-6511a-3p

• Accession: MIMAT0025479
• Sequence: 44 - ccucaccaucccuucugccugc - 65
• Deep sequencing: 6848 reads, 118 experiments
• Evidence: experimental; Illumina [1-2]
• Database links:
  • RNAcentral:URS000075E460_9606
• Predicted targets:
  • TargetScanVert:hsa-miR-6511a-3p
  • miRDB:hsa-miR-6511a-3p

References

1. PMID:21807764 "Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome" Joyce CE, Zhou X, Xia J, Ryan C, Thrash B, Menter A, Zhang W, Bowcock AM Hum Mol Genet. 20:4025-4040(2011).
2. PMID:22313525 "Deep sequencing analysis of small non-coding RNAs reveals the diversity of microRNAs and piRNAs in the human epididymis" Li Y, Wang HY, Wan FC, Liu FJ, Liu J, Zhang N, Jin SH, Li JY Gene. 497:330-335(2012).