Stem-loop sequence hsa-mir-6875

Accession

MI0022722 (change log)

Symbol

HGNC:MIR6875

Description

Homo sapiens miR-6875 stem-loop

Literature search

1 open access papers mention hsa-mir-6875
(1 sentences)

Stem-loop

   gagu      ---  c     a     -   g  cu  g 
5'     cugagg   ga ccagg cagga gaa gc  au g
       ||||||   || ||||| ||||| ||| ||  ||  
3'     gacucc   cu ggucc guccu cuu cg  ua u
   ----      uac  c     c     u   a  uu  g 

Deep sequencing

245 reads, 49.2 reads per million, 63 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr7: 100868036-100868107 [+]
• Overlapping transcripts:

  intergenic

Database links

• HGNC:MIR6875
• miRBase Tracker:MI0022722

Mature sequence hsa-miR-6875-5p

• Accession: MIMAT0027650
• Sequence: 6 - ugagggacccaggacaggaga - 26
• Deep sequencing: 216 reads, 47 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6875-5p
  • miRDB:hsa-miR-6875-5p

Mature sequence hsa-miR-6875-3p

• Accession: MIMAT0027651
• Sequence: 45 - auucuuccugcccuggcuccau - 66
• Deep sequencing: 21 reads, 16 experiments
• Evidence: experimental; meta-analysis [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6875-3p
  • miRDB:hsa-miR-6875-3p

References

1. PMID:22955976 "Discovery of hundreds of mirtrons in mouse and human small RNA data" Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC Genome Res. 22:1634-1645(2012).