miRBase entry: hsa-mir-378j

Stem-loop hsa-mir-378j


Accession
MI0021273
Symbol
HGNC: MIR378J
Description
Homo sapiens hsa-mir-378j precursor miRNA
Gene family
MIPF0001463; mir-378_2

Literature search
189 open access papers mention hsa-mir-378j
(902 sentences)

Sequence

10 reads, 1 reads per million, 5 experiments
augcagugagucggggaggaACUGGAUUUGGAGCCAGAAgaacugguucuaauaucuacuucccuguguagaguugggauuugggauuauaugaguuaauauacaccaa
.((((......((((((((...(((((((((((((((.....)))))))))).)))))))))))))))))..........((((...(((((......)))))..))))

Structure
--------------------------------------a    gugagu        aAC     -          A 
                                       ugca      cggggagg   UGGAU UUGGAGCCAG A
                                       ||||      ||||||||   ||||| |||||||||| g
                                       augu      gucccuuc   aucua aaucuugguc a
aaccacauauaauugaguauauuaggguuuaggguugag    ------        ---     u          a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr17: 37614931-37615039 [-]

Database links

Mature hsa-miR-378j

Accession MIMAT0024612
Description Homo sapiens hsa-miR-378j mature miRNA
Sequence 21 - ACUGGAUUUGGAGCCAGAA - 39
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22454130
    Transcription factors are targeted by differentially expressed miRNAs in primates
    "Dannemann M, Prufer K, Lizano E, Nickel B, Burbano HA, Kelso J"
    "Genome Biol Evol (2012) 4:552-564