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miRBase |
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Stem-loop sequence stu-MIR6026 |
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Accession | MI0020256 (change log) | |||||
Description | Solanum tuberosum miR6026 stem-loop | |||||
Gene family | MIPF0001554; MIR6026 | |||||
Literature search |
1 open access papers mention stu-MIR6026 | |||||
Stem-loop |
-----ugac uu auu c cu c a u --auug u - u uaacuuauuuuucuuu a 5' cacuu auuugguaauacaacu gccaaga aaug u auuauaagugcaua c uuucacuuu uuugagcau guguug auuuc c gaaca a ||||| |||||||||||||||| ||||||| |||| | |||||||||||||| | ||||||||| ||||||||| |||||| ||||| | ||||| 3' gugaa ugaaccguuauguuga cgguucu uuau a uaauguuuacguau g aaagugaga agacucgua cacaac uaaag g uuugu a guuaauuuu -c gau u au u c u gauuga c g c ---------cuacuuu u |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence stu-miR6026-5p |
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Accession | MIMAT0031164 |
Sequence |
19 - aauacaacuauugccaagacaa - 40 |
Evidence | experimental; Illumina [2] |
Mature sequence stu-miR6026-3p |
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Accession | MIMAT0023609 |
Sequence |
201 - uucuuggcuagaguuguauugc - 222 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:22307647
"MicroRNA regulation of plant innate immune receptors"
Proc Natl Acad Sci U S A. 109:1790-1795(2012).
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2 |
PMID:23437348
"Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing"
PLoS One. 8:e57233(2013).
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