Accession
MI0020256
Description
Solanum tuberosum
stu-MIR6026 precursor miRNA
Gene family
MIPF0001554;
MIR6026
Literature search
1 open access papers mention stu-MIR6026
(2 sentences)
(2 sentences)
Sequence
ugaccacuuuuauuugguAAUACAACUAUUGCCAAGACAAugcuucauuauaagugcauaacuuuucacuuuauuguuugagcauuguguugauuucucuaacuuauuuuucuuugaacaaaauuguuuuuucaucgcgaaaugcaacaccaugcucagaaguuagagagugaaaugcuaugcauuuguaauuauauauuUUCUUGGCUAGAGUUGUAUUGCcaagucaaguguuuuaauug
....(((((..((((((((((((((((...(((((((.((((....((((((((((((((.(.(((((((((....(((((((((.(((((((((((.(................(((((....))))).......).))))).)))))).)))))))))......))))))))).).))))))))))))))....)))).)))))))...)))))))))))))))).))))).........
....(((((..((((((((((((((((...(((((((.((((....((((((((((((((.(.(((((((((....(((((((((.(((((((((((.(................(((((....))))).......).))))).)))))).)))))))))......))))))))).).))))))))))))))....)))).)))))))...)))))))))))))))).))))).........
Structure
-----ugac uu AUU C cuuc a u --auug u - u uaacuuauuuuucuuu a
cacuu auuugguAAUACAACU GCCAAGA AAug auuauaagugcaua c uuucacuuu uuugagcau guguug auuuc c gaaca a
||||| |||||||||||||||| ||||||| |||| |||||||||||||| | ||||||||| ||||||||| |||||| ||||| | |||||
gugaa ugaacCGUUAUGUUGA CGGUUCU uuau uaauguuuacguau g aaagugaga agacucgua cacaac uaaag g uuugu a
guuaauuuu -c GAU U auau c u gauuga c g c ---------cuacuuu u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
JH137959.1: 711491-711732 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from stu-MIR6026
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature stu-miR6026-3p
| Accession | MIMAT0023609 |
| Description | Solanum tuberosum stu-miR6026-3p mature miRNA |
| Sequence | 201 - UUCUUGGCUAGAGUUGUAUUGC - 222 |
| Evidence |
experimental
Illumina [2] |
Mature stu-miR6026-5p
| Accession | MIMAT0031164 |
| Description | Solanum tuberosum stu-miR6026-5p mature miRNA |
| Sequence | 19 - AAUACAACUAUUGCCAAGACAA - 40 |
| Evidence |
experimental
Illumina [2] |
References
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