Stem-loop mtr-MIR5755

Accession

MI0019682

Description

Medicago truncatula mtr-MIR5755 precursor miRNA

Sequence

aaucguguguCUUUAACGCGGGAAAGACACAugucuuucagucaaaucuauccauugaaugaaucacauuaagccaugcguucaucuauuaaauuaugggucgaauacgcggcuuaauucaauacauucgauugaucugauggacgaacuugacugaaagcggcgugucuuuucugcgccaaagacacucaauu
....(.((((((((..((((((((((((((.((.((((((((((((((.(((.((((((((......((((((((.((.((((((((((......)))))).)))).)).))))))))......)))))))).)))..)))........)))))))))))))..))))))))))))))..)))))))).)....

Structure

aauc u        AA              -A  u           --------   -u   c        aaucac        a  c    -      ua 
    g guguCUUU  CGCGGGAAAGACAC  ug cuuucagucaa        auc  auc auugaaug      auuaagcc ug guuc aucuau  a
    | ||||||||  ||||||||||||||  || |||||||||||        |||  ||| ||||||||      |||||||| || |||| ||||||   
    c cacagaaa  gcgucuuuucugug  gc gaaagucaguu        uag  uag uagcuuac      uaauucgg gc uaag ugggua  a
uuaa u        cc              cg  -           caagcagg   uc   u        auaacu        c  a    c      uu 

Annotation confidence Not enough data

Genome context

chr4: 24877189-24877382 [-]

Mature mtr-miR5755

• Accession: MIMAT0023137
• Description: Medicago truncatula mtr-miR5755 mature miRNA
• Sequence: 11 - CUUUAACGCGGGAAAGACACA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553