Stem-loop sequence hsa-mir-5692a-2

Accession

MI0019298 (change log)

Symbol

HGNC:MIR5692A2

Description

Homo sapiens miR-5692a-2 stem-loop

Gene family

MIPF0001351; mir-5692

Stem-loop

              c    gu        - uc 
5' uacaaauaaua caca  ggguguac c  a
   ||||||||||| ||||  |||||||| |   
3' auguuuauuau gugu  cccacaug g  u
              a    --        u ug 

Deep sequencing

140 reads, 0 reads per million, 41 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr8: 12719132-12719190 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from hsa-mir-5692a-2

• hsa-mir-5692a-2: chr8: 12719132-12719190 [+]
• hsa-mir-3926-1: chr8: 12727232-12727304 [-]
• hsa-mir-3926-2: chr8: 12727237-12727299 [+]

Database links

• HGNC:MIR5692A2
• miRBase Tracker:MI0019298

Mature sequence hsa-miR-5692a

• Accession: MIMAT0022484
• Sequence: 3 - caaauaauaccacagugggugu - 24
• Deep sequencing: 275 reads, 42 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-5692a
  • TargetScanVert:hsa-miR-5692a
  • miRDB:hsa-miR-5692a

References

1. PMID:21980368 "MicroRNAs associated with metastatic prostate cancer" Watahiki A, Wang Y, Morris J, Dennis K, O'Dwyer HM, Gleave M, Gout PW, Wang Y PLoS One. 6:e24950(2011).