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miRBase |
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Stem-loop sequence bdi-MIR5185b |
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Accession | MI0018159 (change log) | ||||
Description | Brachypodium distachyon miR5185b stem-loop | ||||
Gene family | MIPF0001246; MIR5185 | ||||
Literature search |
1 open access papers mention bdi-MIR5185b | ||||
Stem-loop |
--------------uuaggguuguguac a u uc auuuu 5' uc cgcgaaagucccgcuucuaguuca uuuucaaaucu uauucaaa g || |||||||||||||||||||||||| ||||||||||| |||||||| c 3' ag gcguuuucagggcgaagaucaagu aagaguuugga auaaguuu u cccgaccacucauucccacguuugcccu g u ga aauac |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence bdi-miR5185b-5p |
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Accession | MIMAT0020735 |
Sequence |
32 - uucuaguucauuuuucaaauc - 52 |
Evidence | experimental; Illumina [2] |
Mature sequence bdi-miR5185b-3p |
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Accession | MIMAT0027087 |
Sequence |
90 - uuugagaauugaacuagaagc - 110 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:21371551
"Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs"
Genomics. 97:282-293(2011).
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2 |
PMID:23264558
"Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon"
Mol Plant. 6:423-443(2013).
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