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miRBase |
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Stem-loop sequence bdi-MIR5179 |
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Accession | MI0018151 (change log) | ||||
Description | Brachypodium distachyon miR5179 stem-loop | ||||
Gene family | MIPF0001641; MIR5179 | ||||
Stem-loop |
-guugcuc caucccu -- - - a aguu uga c c c uu auauaucu aguucgaccaauggaucuaaggaa 5' cuu agauc ucuca uguu uugcucaagaccgcgca c ccaua ca cgcaucg ugu c gccuauc cauga g ||| ||||| ||||| |||| ||||||||||||||||| | ||||| || ||||||| ||| | ||||||| ||||| 3' gaa ucuag agagu gcaa aacgaguucuggcgugu g gguau gu gcguagc gca g uggauag guacu a uauuuaua cuuauuc gc u u c gacu -ug c u a uc ---gaaau agguguacgaacguuagaaaaaga |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence bdi-miR5179 |
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Accession | MIMAT0020727 |
Sequence |
30 - uuuugcucaagaccgcgcaac - 50 |
Evidence | not experimental |
References |
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1 |
PMID:21371551
"Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs"
Genomics. 97:282-293(2011).
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