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miRBase |
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Stem-loop sequence bdi-MIR160e |
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Accession | MI0018107 (change log) | ||||
Description | Brachypodium distachyon miR160e stem-loop | ||||
Gene family | MIPF0000032; MIR160 | ||||
Literature search |
2 open access papers mention bdi-MIR160e | ||||
Stem-loop |
-u uaauuaa u u ---- c g u ga ag a cc 5' aagg uggg gaugu gccu uccugc uggcucccu aaugcca cu ga cac cca g |||| |||| ||||| |||| |||||| ||||||||| ||||||| || || ||| ||| u 3' uucc gcuc cugca ugga gggacg acugaggga uuacggu gg cu gug ggu g ac cucauuc - - cguu u g u uc cg c cc |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence bdi-miR160e-5p |
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Accession | MIMAT0020682 |
Sequence |
31 - ugccuggcucccugaaugcca - 51 |
Evidence | experimental; Illumina [2] |
Mature sequence bdi-miR160e-3p |
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Accession | MIMAT0027059 |
Sequence |
93 - gcauugagggagucaugcagg - 113 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:21371551
"Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs"
Genomics. 97:282-293(2011).
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2 |
PMID:23264558
"Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon"
Mol Plant. 6:423-443(2013).
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