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miRBase |
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Stem-loop sequence bdi-MIR167d |
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Accession | MI0018102 (change log) | ||||
Description | Brachypodium distachyon miR167d stem-loop | ||||
Gene family | MIPF0000023; MIR167_1 | ||||
Literature search |
3 open access papers mention bdi-MIR167d | ||||
Stem-loop |
------ cgg caa a - gu c -uc guccaacguaaccgaacacaugucgaucgacuuccgauugcgc 5' ugga cu uuug uggug ugagag ugaagcugc agcaugaucuga acc c |||| || |||| ||||| |||||| ||||||||| |||||||||||| ||| 3' accu ga aagc accac acucuc acuucgacg uuguacuagacu ugg g aauuaa --a --- c u uc - ucu gaacguuaccuucgaguauauauauauaaggaugguucuauug |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence bdi-miR167d-5p |
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Accession | MIMAT0020677 |
Sequence |
31 - ugaagcugccagcaugaucuga - 52 |
Evidence | experimental; Illumina [2] |
Mature sequence bdi-miR167d-3p |
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Accession | MIMAT0027056 |
Sequence |
154 - agaucauguugcagcuucac - 173 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:21371551
"Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs"
Genomics. 97:282-293(2011).
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2 |
PMID:23264558
"Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon"
Mol Plant. 6:423-443(2013).
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