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miRBase |
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Stem-loop sequence bdi-MIR160c |
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Accession | MI0018100 (change log) | ||||
Description | Brachypodium distachyon miR160c stem-loop | ||||
Gene family | MIPF0000032; MIR160 | ||||
Literature search |
2 open access papers mention bdi-MIR160c | ||||
Stem-loop |
-----uaa - - caa acu u c c a - c c - u 5' auugau gauc ugau g gugc gugc uggcucc uguaugccac cau guag c agcc ca g |||||| |||| |||| | |||| |||| ||||||| |||||||||| ||| |||| | |||| || 3' uaauua cuag auua c uacg uacg accgagg acgugcggug gug cguc g uugg gu a uuggucuc a u -cg -au - a a g u c u u a |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence bdi-miR160c-5p |
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Accession | MIMAT0020675 |
Sequence |
31 - ugccuggcucccuguaugcca - 51 |
Evidence | experimental; Illumina [2] |
Mature sequence bdi-miR160c-3p |
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Accession | MIMAT0027054 |
Sequence |
96 - gcgugcaaggagccaagcaug - 116 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:21371551
"Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs"
Genomics. 97:282-293(2011).
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2 |
PMID:23264558
"Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon"
Mol Plant. 6:423-443(2013).
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