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miRBase |
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Stem-loop sequence bdi-MIR390a |
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Accession | MI0018085 (change log) | ||||
Previous IDs | bdi-MIR390 | ||||
Description | Brachypodium distachyon miR390 stem-loop | ||||
Gene family | MIPF0000101; MIR390 | ||||
Literature search |
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3 open access papers mention bdi-MIR390a | ||||
Stem-loop |
ccaaucgagauc --- aau u a g cuagguucacugcaaccaacaagagaaccggccaucgauauauacauauaua 5' gguaag gaac cc ug agcucagga ggauagcgc u |||||| |||| || || ||||||||| ||||||||| g 3' ccauuc cuug gg ac ucgaguccu ucuaucgcg u -acacacccgua uug cuu c c a aagccugcuugucuagcugccuuggucguucucuagcuagccagcuagcucc |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence bdi-miR390a-5p |
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Accession | MIMAT0020660 |
Previous IDs | bdi-miR390 |
Sequence |
31 - aagcucaggagggauagcgcc - 51 |
Evidence | experimental; Illumina [2] |
Mature sequence bdi-miR390a-3p |
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Accession | MIMAT0027043 |
Sequence |
159 - cgcuaucuauccugagcucca - 179 |
Evidence | experimental; Illumina [2] |
References |
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1 |
PMID:21371551
"Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs"
Genomics. 97:282-293(2011).
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2 |
PMID:23264558
"Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon"
Mol Plant. 6:423-443(2013).
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