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miRBase |
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Stem-loop sequence bdi-MIR395a |
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Accession | MI0018081 (change log) | ||||
Description | Brachypodium distachyon miR395a stem-loop | ||||
Gene family | MIPF0000016; MIR395 | ||||
Literature search |
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3 open access papers mention bdi-MIR395a | ||||
Stem-loop |
ca a ----aaug a u u guagcuagcuagcuagcuugugccucauuguuucauugc 5' gg gaug guugguuguca cuggaguucucc caaa cacuuca c || |||| ||||||||||| |||||||||||| |||| ||||||| g 3' cc cuau caaccaacggu ggccucaagggg guuu gugaagu c -- a agucauaa g - - gacacgugccgagaggucgagguacgugugaauauuugu |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence bdi-miR395a |
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Accession | MIMAT0020656 |
Sequence |
132 - ugaaguguuugggggaacuc - 151 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:19772667
"Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response"
BMC Genomics. 10:449(2009).
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2 |
PMID:21371551
"Implementation of a de novo genome-wide computational approach for updating Brachypodium miRNAs"
Genomics. 97:282-293(2011).
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