Stem-loop hvu-MIR444b

Accession

MI0017934

Description

Hordeum vulgare hvu-MIR444b precursor miRNA

Gene family

MIPF0000402; MIR444

Literature search

6 open access papers mention hvu-MIR444b
(17 sentences)

Sequence

gguggcaccaagcaugaggcaacaacugcauuacuuucaaggaaguuacaaaaucuaugggucuucauaaucgugacuuucuugcaaguugUGCAGUUGCUGUCUCAAGCUUgcugacucc
((.(.((.(((((.(((((((.(((((((((.((((.((((((((((((...((.(((((....))))))).)))))))))))).)))).))))))))).))))))).))))).)).).))

Structure

  u g  c     a       a         u    u            aaa  c     g 
gg g ca caagc ugaggca caacugcau acuu caaggaaguuac   au uaugg u
|| | || ||||| ||||||| ||||||||| |||| ||||||||||||   || |||||  
cc c gu gUUCG ACUCUGU GUUGACGUg ugaa guucuuucagug   ua auacu c
  u a  c     A       C         u    c            --c  -     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR444b

• Accession: MIMAT0020543
• Description: Hordeum vulgare hvu-miR444b mature miRNA
• Sequence: 92 - UGCAGUUGCUGUCUCAAGCUU - 112
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21352554
   Discovery of barley miRNAs through deep sequencing of short reads
   Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U
   BMC Genomics (2011) 12:129